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Cluster: HRGMv2_2041_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2041_4 HRGMv2_2041_4_20 21801 23753 + GH31_1
STP HRGMv2_2041_4 HRGMv2_2041_4_21 23897 25651 - HATPase_c
CAZyme HRGMv2_2041_4 HRGMv2_2041_4_22 25885 27930 - GH31_4
STP HRGMv2_2041_4 HRGMv2_2041_4_23 28058 29728 - SBP_bac_1
TC HRGMv2_2041_4 HRGMv2_2041_4_24 29785 30696 - 3.A.1.1.10
TC HRGMv2_2041_4 HRGMv2_2041_4_25 30735 31676 - 3.A.1.1.10
Gene ID: HRGMv2_2041_4_20
Type: CAZyme
Location: 21801 - 23753 (+)
Gene ID: HRGMv2_2041_4_21
Type: STP
Location: 23897 - 25651 (-)
Gene ID: HRGMv2_2041_4_22
Type: CAZyme
Location: 25885 - 27930 (-)
Gene ID: HRGMv2_2041_4_23
Type: STP
Location: 28058 - 29728 (-)
Gene ID: HRGMv2_2041_4_24
Type: TC
Location: 29785 - 30696 (-)
Gene ID: HRGMv2_2041_4_25
Type: TC
Location: 30735 - 31676 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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