Cluster: HRGMv2_2041_CGC15
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2041
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2041_3 | HRGMv2_2041_3_204 | 225948 | 227012 | + | 9.A.23.1.1 |
| peptidase | HRGMv2_2041_3 | HRGMv2_2041_3_205 | 227100 | 228983 | - | S12.UPW |
| TC | HRGMv2_2041_3 | HRGMv2_2041_3_206 | 229161 | 230783 | - | 3.A.1.1.29 |
| TC | HRGMv2_2041_3 | HRGMv2_2041_3_207 | 230805 | 231704 | - | 3.A.1.1.29 |
| TC | HRGMv2_2041_3 | HRGMv2_2041_3_208 | 231716 | 232672 | - | 3.A.1.1.29 |
| STP | HRGMv2_2041_3 | HRGMv2_2041_3_209 | 232956 | 234668 | - | HATPase_c | dCache_1 |
| TF | HRGMv2_2041_3 | HRGMv2_2041_3_210 | 234646 | 236142 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2041_3 | HRGMv2_2041_3_211 | 236209 | 237840 | - | GH13_31 |
| TF | HRGMv2_2041_3 | HRGMv2_2041_3_212 | 237942 | 238904 | + | HTH_AraC | HTH_AraC |
| pfam | HRGMv2_2041_3 | HRGMv2_2041_3_213 | 239312 | 240196 | - | SH3_3 |
| CAZyme | HRGMv2_2041_3 | HRGMv2_2041_3_214 | 240394 | 242589 | - | GH36 |
Gene ID: HRGMv2_2041_3_204
Type: TC
Location: 225948 - 227012 (+)
Type: TC
Location: 225948 - 227012 (+)
Gene ID: HRGMv2_2041_3_205
Type: peptidase
Location: 227100 - 228983 (-)
Type: peptidase
Location: 227100 - 228983 (-)
Gene ID: HRGMv2_2041_3_206
Type: TC
Location: 229161 - 230783 (-)
Type: TC
Location: 229161 - 230783 (-)
Gene ID: HRGMv2_2041_3_207
Type: TC
Location: 230805 - 231704 (-)
Type: TC
Location: 230805 - 231704 (-)
Gene ID: HRGMv2_2041_3_208
Type: TC
Location: 231716 - 232672 (-)
Type: TC
Location: 231716 - 232672 (-)
Gene ID: HRGMv2_2041_3_209
Type: STP
Location: 232956 - 234668 (-)
Type: STP
Location: 232956 - 234668 (-)
Gene ID: HRGMv2_2041_3_210
Type: TF
Location: 234646 - 236142 (-)
Type: TF
Location: 234646 - 236142 (-)
Gene ID: HRGMv2_2041_3_211
Type: CAZyme
Location: 236209 - 237840 (-)
Type: CAZyme
Location: 236209 - 237840 (-)
Gene ID: HRGMv2_2041_3_212
Type: TF
Location: 237942 - 238904 (+)
Type: TF
Location: 237942 - 238904 (+)
Gene ID: HRGMv2_2041_3_213
Type: pfam
Location: 239312 - 240196 (-)
Type: pfam
Location: 239312 - 240196 (-)
Gene ID: HRGMv2_2041_3_214
Type: CAZyme
Location: 240394 - 242589 (-)
Type: CAZyme
Location: 240394 - 242589 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fusicatenibacter
Species
Fusicatenibacter saccharivorans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.