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Cluster: HRGMv2_2037_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2037_2 HRGMv2_2037_2_95 97593 98609 - 3.A.1.144.2
pfam HRGMv2_2037_2 HRGMv2_2037_2_96 98616 99980 - NPCBM_assoc
peptidase HRGMv2_2037_2 HRGMv2_2037_2_97 100123 101607 - C69.001
CAZyme HRGMv2_2037_2 HRGMv2_2037_2_98 101753 103153 - GH4
TF HRGMv2_2037_2 HRGMv2_2037_2_99 103305 104198 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_2037_2 HRGMv2_2037_2_100 104180 105733 - CBM91 | GH43_11
CAZyme HRGMv2_2037_2 HRGMv2_2037_2_101 105745 107799 - GH95
TC HRGMv2_2037_2 HRGMv2_2037_2_102 107851 108690 - 3.A.1.1.11
TC HRGMv2_2037_2 HRGMv2_2037_2_103 108707 109618 - 3.A.1.1.11
Gene ID: HRGMv2_2037_2_95
Type: TC
Location: 97593 - 98609 (-)
Gene ID: HRGMv2_2037_2_96
Type: pfam
Location: 98616 - 99980 (-)
Gene ID: HRGMv2_2037_2_97
Type: peptidase
Location: 100123 - 101607 (-)
Gene ID: HRGMv2_2037_2_98
Type: CAZyme
Location: 101753 - 103153 (-)
Gene ID: HRGMv2_2037_2_99
Type: TF
Location: 103305 - 104198 (+)
Gene ID: HRGMv2_2037_2_100
Type: CAZyme
Location: 104180 - 105733 (-)
Gene ID: HRGMv2_2037_2_101
Type: CAZyme
Location: 105745 - 107799 (-)
Gene ID: HRGMv2_2037_2_102
Type: TC
Location: 107851 - 108690 (-)
Gene ID: HRGMv2_2037_2_103
Type: TC
Location: 108707 - 109618 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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