Cluster: HRGMv2_2037_CGC55
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2037
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2037_56 | HRGMv2_2037_56_6 | 4605 | 5507 | - | 3.A.1.132.6 |
| CAZyme | HRGMv2_2037_56 | HRGMv2_2037_56_7 | 5713 | 7815 | - | GH3 |
| pfam | HRGMv2_2037_56 | HRGMv2_2037_56_8 | 7843 | 8889 | - | ADH_zinc_N | ADH_N | ADH_zinc_N_2 | Glu_dehyd_C |
| CAZyme | HRGMv2_2037_56 | HRGMv2_2037_56_9 | 8992 | 11904 | - | GH115 |
Gene ID: HRGMv2_2037_56_6
Type: TC
Location: 4605 - 5507 (-)
Type: TC
Location: 4605 - 5507 (-)
Gene ID: HRGMv2_2037_56_7
Type: CAZyme
Location: 5713 - 7815 (-)
Type: CAZyme
Location: 5713 - 7815 (-)
Gene ID: HRGMv2_2037_56_8
Type: pfam
Location: 7843 - 8889 (-)
Type: pfam
Location: 7843 - 8889 (-)
Gene ID: HRGMv2_2037_56_9
Type: CAZyme
Location: 8992 - 11904 (-)
Type: CAZyme
Location: 8992 - 11904 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp905214955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.