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Cluster: HRGMv2_2037_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2037_51 HRGMv2_2037_51_2 1577 2458 + 3.A.1.1.36
TC HRGMv2_2037_51 HRGMv2_2037_51_3 2461 3291 + 3.A.1.1.41
CAZyme HRGMv2_2037_51 HRGMv2_2037_51_4 3288 4466 + CE15
TF HRGMv2_2037_51 HRGMv2_2037_51_5 4510 5346 + HTH_AraC | HTH_AraC
TF HRGMv2_2037_51 HRGMv2_2037_51_6 5304 6185 + HTH_AraC
TC HRGMv2_2037_51 HRGMv2_2037_51_7 6677 8416 + 3.A.1.5.6
TC HRGMv2_2037_51 HRGMv2_2037_51_8 8477 9466 + 3.A.1.5.20
TC HRGMv2_2037_51 HRGMv2_2037_51_9 9456 10280 + 3.A.1.5.14
TC HRGMv2_2037_51 HRGMv2_2037_51_10 10273 11229 + 3.A.1.5.22
TC HRGMv2_2037_51 HRGMv2_2037_51_11 11192 11863 + 3.A.1.5.20
Gene ID: HRGMv2_2037_51_2
Type: TC
Location: 1577 - 2458 (+)
Gene ID: HRGMv2_2037_51_3
Type: TC
Location: 2461 - 3291 (+)
Gene ID: HRGMv2_2037_51_4
Type: CAZyme
Location: 3288 - 4466 (+)
Gene ID: HRGMv2_2037_51_5
Type: TF
Location: 4510 - 5346 (+)
Gene ID: HRGMv2_2037_51_6
Type: TF
Location: 5304 - 6185 (+)
Gene ID: HRGMv2_2037_51_7
Type: TC
Location: 6677 - 8416 (+)
Gene ID: HRGMv2_2037_51_8
Type: TC
Location: 8477 - 9466 (+)
Gene ID: HRGMv2_2037_51_9
Type: TC
Location: 9456 - 10280 (+)
Gene ID: HRGMv2_2037_51_10
Type: TC
Location: 10273 - 11229 (+)
Gene ID: HRGMv2_2037_51_11
Type: TC
Location: 11192 - 11863 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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