Cluster: HRGMv2_2037_CGC52
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2037
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2037_42 | HRGMv2_2037_42_6 | 6473 | 8734 | - | GH95 |
| TC | HRGMv2_2037_42 | HRGMv2_2037_42_7 | 8840 | 9658 | - | 3.A.1.1.45 |
| TC | HRGMv2_2037_42 | HRGMv2_2037_42_8 | 9658 | 10536 | - | 3.A.1.1.7 |
| STP | HRGMv2_2037_42 | HRGMv2_2037_42_9 | 10604 | 11914 | - | SBP_bac_1 |
| TC | HRGMv2_2037_42 | HRGMv2_2037_42_10 | 12178 | 13974 | + | 8.A.59.2.1 |
Gene ID: HRGMv2_2037_42_6
Type: CAZyme
Location: 6473 - 8734 (-)
Type: CAZyme
Location: 6473 - 8734 (-)
Gene ID: HRGMv2_2037_42_7
Type: TC
Location: 8840 - 9658 (-)
Type: TC
Location: 8840 - 9658 (-)
Gene ID: HRGMv2_2037_42_8
Type: TC
Location: 9658 - 10536 (-)
Type: TC
Location: 9658 - 10536 (-)
Gene ID: HRGMv2_2037_42_9
Type: STP
Location: 10604 - 11914 (-)
Type: STP
Location: 10604 - 11914 (-)
Gene ID: HRGMv2_2037_42_10
Type: TC
Location: 12178 - 13974 (+)
Type: TC
Location: 12178 - 13974 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp905214955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.