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Cluster: HRGMv2_2037_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2037_41 HRGMv2_2037_41_10 10607 12286 - 3.A.1.5.18
TC HRGMv2_2037_41 HRGMv2_2037_41_11 12395 13372 - 3.A.1.5.20
TC HRGMv2_2037_41 HRGMv2_2037_41_12 13369 14424 - 3.A.1.5.15
TC HRGMv2_2037_41 HRGMv2_2037_41_13 14440 15591 - 3.A.1.5.19
TC HRGMv2_2037_41 HRGMv2_2037_41_14 15622 16539 - 3.A.1.5.2
CAZyme HRGMv2_2037_41 HRGMv2_2037_41_15 16747 18420 - GH13_31
pfam HRGMv2_2037_41 HRGMv2_2037_41_16 18445 20169 - DUF5722
peptidase HRGMv2_2037_41 HRGMv2_2037_41_17 20645 22039 + C82.001
TC HRGMv2_2037_41 HRGMv2_2037_41_18 22107 22829 - 3.A.3.5.15
NULL(UNKNOWN) HRGMv2_2037_41 HRGMv2_2037_41_19 23260 24087 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2037_41 HRGMv2_2037_41_20 24178 26016 - 3.A.16.1.2
Gene ID: HRGMv2_2037_41_10
Type: TC
Location: 10607 - 12286 (-)
Gene ID: HRGMv2_2037_41_11
Type: TC
Location: 12395 - 13372 (-)
Gene ID: HRGMv2_2037_41_12
Type: TC
Location: 13369 - 14424 (-)
Gene ID: HRGMv2_2037_41_13
Type: TC
Location: 14440 - 15591 (-)
Gene ID: HRGMv2_2037_41_14
Type: TC
Location: 15622 - 16539 (-)
Gene ID: HRGMv2_2037_41_15
Type: CAZyme
Location: 16747 - 18420 (-)
Gene ID: HRGMv2_2037_41_16
Type: pfam
Location: 18445 - 20169 (-)
Gene ID: HRGMv2_2037_41_17
Type: peptidase
Location: 20645 - 22039 (+)
Gene ID: HRGMv2_2037_41_18
Type: TC
Location: 22107 - 22829 (-)
Gene ID: HRGMv2_2037_41_19
Type:
Location: 23260 - 24087 (-)
Gene ID: HRGMv2_2037_41_20
Type: TC
Location: 24178 - 26016 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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