Cluster: HRGMv2_2037_CGC49
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2037
- CGC Family ID: CGCFAM_05143
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2037_36 | HRGMv2_2037_36_19 | 19658 | 20962 | - | 2.A.23.1.5 |
| pfam | HRGMv2_2037_36 | HRGMv2_2037_36_20 | 20983 | 21825 | - | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| TF | HRGMv2_2037_36 | HRGMv2_2037_36_21 | 21906 | 22700 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2037_36 | HRGMv2_2037_36_22 | 22823 | 24142 | + | GH4 |
Gene ID: HRGMv2_2037_36_19
Type: TC
Location: 19658 - 20962 (-)
Type: TC
Location: 19658 - 20962 (-)
Gene ID: HRGMv2_2037_36_20
Type: pfam
Location: 20983 - 21825 (-)
Type: pfam
Location: 20983 - 21825 (-)
Gene ID: HRGMv2_2037_36_21
Type: TF
Location: 21906 - 22700 (-)
Type: TF
Location: 21906 - 22700 (-)
Gene ID: HRGMv2_2037_36_22
Type: CAZyme
Location: 22823 - 24142 (+)
Type: CAZyme
Location: 22823 - 24142 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp905214955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.