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Cluster: HRGMv2_2037_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2037_32 HRGMv2_2037_32_14 19988 23164 - GH106
TC HRGMv2_2037_32 HRGMv2_2037_32_15 23180 24016 - 3.A.1.1.36
TC HRGMv2_2037_32 HRGMv2_2037_32_16 24016 24921 - 3.A.1.1.7
STP HRGMv2_2037_32 HRGMv2_2037_32_17 25111 26412 - SBP_bac_1
TF HRGMv2_2037_32 HRGMv2_2037_32_18 26722 27426 - GntR
TC HRGMv2_2037_32 HRGMv2_2037_32_19 27699 28295 - 2.A.115.2.14
TC HRGMv2_2037_32 HRGMv2_2037_32_20 28309 29661 - 2.A.45.2.2
STP HRGMv2_2037_32 HRGMv2_2037_32_21 29866 30891 - Peptidase_M23
CAZyme HRGMv2_2037_32 HRGMv2_2037_32_22 31059 33515 - GT35
Gene ID: HRGMv2_2037_32_14
Type: CAZyme
Location: 19988 - 23164 (-)
Gene ID: HRGMv2_2037_32_15
Type: TC
Location: 23180 - 24016 (-)
Gene ID: HRGMv2_2037_32_16
Type: TC
Location: 24016 - 24921 (-)
Gene ID: HRGMv2_2037_32_17
Type: STP
Location: 25111 - 26412 (-)
Gene ID: HRGMv2_2037_32_18
Type: TF
Location: 26722 - 27426 (-)
Gene ID: HRGMv2_2037_32_19
Type: TC
Location: 27699 - 28295 (-)
Gene ID: HRGMv2_2037_32_20
Type: TC
Location: 28309 - 29661 (-)
Gene ID: HRGMv2_2037_32_21
Type: STP
Location: 29866 - 30891 (-)
Gene ID: HRGMv2_2037_32_22
Type: CAZyme
Location: 31059 - 33515 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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