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Cluster: HRGMv2_2037_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2037_31 HRGMv2_2037_31_10 10136 10999 + 3.A.1.1.7
TC HRGMv2_2037_31 HRGMv2_2037_31_11 10999 11835 + 3.A.1.1.45
CAZyme HRGMv2_2037_31 HRGMv2_2037_31_12 11860 14961 + GH106
TC HRGMv2_2037_31 HRGMv2_2037_31_13 14977 16764 + 8.A.59.2.1
TF HRGMv2_2037_31 HRGMv2_2037_31_14 16730 17596 + HTH_AraC
pfam HRGMv2_2037_31 HRGMv2_2037_31_15 17705 18703 + Asparaginase | Asparaginase_C
TC HRGMv2_2037_31 HRGMv2_2037_31_16 18801 20216 + 2.A.66.1.26
pfam HRGMv2_2037_31 HRGMv2_2037_31_17 20200 20763 + Acetyltransf_1 | Acetyltransf_7
TC HRGMv2_2037_31 HRGMv2_2037_31_18 21048 21527 + 3.D.1.5.1
TC HRGMv2_2037_31 HRGMv2_2037_31_19 21524 23395 + 3.D.1.5.1
Gene ID: HRGMv2_2037_31_10
Type: TC
Location: 10136 - 10999 (+)
Gene ID: HRGMv2_2037_31_11
Type: TC
Location: 10999 - 11835 (+)
Gene ID: HRGMv2_2037_31_12
Type: CAZyme
Location: 11860 - 14961 (+)
Gene ID: HRGMv2_2037_31_13
Type: TC
Location: 14977 - 16764 (+)
Gene ID: HRGMv2_2037_31_14
Type: TF
Location: 16730 - 17596 (+)
Gene ID: HRGMv2_2037_31_15
Type: pfam
Location: 17705 - 18703 (+)
Gene ID: HRGMv2_2037_31_16
Type: TC
Location: 18801 - 20216 (+)
Gene ID: HRGMv2_2037_31_17
Type: pfam
Location: 20200 - 20763 (+)
Gene ID: HRGMv2_2037_31_18
Type: TC
Location: 21048 - 21527 (+)
Gene ID: HRGMv2_2037_31_19
Type: TC
Location: 21524 - 23395 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2037_31_19 vegan > omnivore 1.23276 0.01057

🧭 Explore Read Mapping of CGC

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