Cluster: HRGMv2_2037_CGC45
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2037
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2037_29 | HRGMv2_2037_29_18 | 28143 | 28850 | - | 3.A.1.3.13 |
| TC | HRGMv2_2037_29 | HRGMv2_2037_29_19 | 28847 | 29530 | - | 3.A.1.3.13 |
| TC | HRGMv2_2037_29 | HRGMv2_2037_29_20 | 29704 | 30573 | - | 3.A.1.3.13 |
| TC | HRGMv2_2037_29 | HRGMv2_2037_29_21 | 30600 | 31355 | - | 3.A.1.3.13 |
| pfam | HRGMv2_2037_29 | HRGMv2_2037_29_22 | 31369 | 31686 | - | Thioredoxin |
| CAZyme | HRGMv2_2037_29 | HRGMv2_2037_29_23 | 31864 | 33744 | - | GH20 |
Gene ID: HRGMv2_2037_29_18
Type: TC
Location: 28143 - 28850 (-)
Type: TC
Location: 28143 - 28850 (-)
Gene ID: HRGMv2_2037_29_19
Type: TC
Location: 28847 - 29530 (-)
Type: TC
Location: 28847 - 29530 (-)
Gene ID: HRGMv2_2037_29_20
Type: TC
Location: 29704 - 30573 (-)
Type: TC
Location: 29704 - 30573 (-)
Gene ID: HRGMv2_2037_29_21
Type: TC
Location: 30600 - 31355 (-)
Type: TC
Location: 30600 - 31355 (-)
Gene ID: HRGMv2_2037_29_22
Type: pfam
Location: 31369 - 31686 (-)
Type: pfam
Location: 31369 - 31686 (-)
Gene ID: HRGMv2_2037_29_23
Type: CAZyme
Location: 31864 - 33744 (-)
Type: CAZyme
Location: 31864 - 33744 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp905214955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.