Cluster: HRGMv2_2037_CGC41
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2037
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2037_26 | HRGMv2_2037_26_10 | 6712 | 7506 | + | 9.B.28.1.2 |
| peptidase | HRGMv2_2037_26 | HRGMv2_2037_26_11 | 7724 | 8659 | - | S33.UPW |
| TF | HRGMv2_2037_26 | HRGMv2_2037_26_12 | 8958 | 10142 | + | MarR |
| CAZyme | HRGMv2_2037_26 | HRGMv2_2037_26_13 | 10093 | 12090 | - | GH127 |
| CAZyme | HRGMv2_2037_26 | HRGMv2_2037_26_14 | 12228 | 14237 | - | GH42 |
Gene ID: HRGMv2_2037_26_10
Type: TC
Location: 6712 - 7506 (+)
Type: TC
Location: 6712 - 7506 (+)
Gene ID: HRGMv2_2037_26_11
Type: peptidase
Location: 7724 - 8659 (-)
Type: peptidase
Location: 7724 - 8659 (-)
Gene ID: HRGMv2_2037_26_12
Type: TF
Location: 8958 - 10142 (+)
Type: TF
Location: 8958 - 10142 (+)
Gene ID: HRGMv2_2037_26_13
Type: CAZyme
Location: 10093 - 12090 (-)
Type: CAZyme
Location: 10093 - 12090 (-)
Gene ID: HRGMv2_2037_26_14
Type: CAZyme
Location: 12228 - 14237 (-)
Type: CAZyme
Location: 12228 - 14237 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp905214955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.