Cluster: HRGMv2_2037_CGC33
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2037
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2037_16 | HRGMv2_2037_16_26 | 27638 | 29857 | - | GH3 |
| pfam | HRGMv2_2037_16 | HRGMv2_2037_16_27 | 29876 | 30706 | - | Hydrolase | S6PP | S6PP | Hydrolase_3 |
| TC | HRGMv2_2037_16 | HRGMv2_2037_16_28 | 30882 | 31529 | - | 2.A.38.4.4 |
| TC | HRGMv2_2037_16 | HRGMv2_2037_16_29 | 31556 | 32935 | - | 2.A.38.4.1 |
| peptidase | HRGMv2_2037_16 | HRGMv2_2037_16_30 | 33079 | 33996 | - | S09.UPW |
| TC | HRGMv2_2037_16 | HRGMv2_2037_16_31 | 34024 | 35358 | - | 2.A.66.1.32 |
| TC | HRGMv2_2037_16 | HRGMv2_2037_16_32 | 35393 | 37012 | - | 8.A.7.1.1 |
Gene ID: HRGMv2_2037_16_26
Type: CAZyme
Location: 27638 - 29857 (-)
Type: CAZyme
Location: 27638 - 29857 (-)
Gene ID: HRGMv2_2037_16_27
Type: pfam
Location: 29876 - 30706 (-)
Type: pfam
Location: 29876 - 30706 (-)
Gene ID: HRGMv2_2037_16_28
Type: TC
Location: 30882 - 31529 (-)
Type: TC
Location: 30882 - 31529 (-)
Gene ID: HRGMv2_2037_16_29
Type: TC
Location: 31556 - 32935 (-)
Type: TC
Location: 31556 - 32935 (-)
Gene ID: HRGMv2_2037_16_30
Type: peptidase
Location: 33079 - 33996 (-)
Type: peptidase
Location: 33079 - 33996 (-)
Gene ID: HRGMv2_2037_16_31
Type: TC
Location: 34024 - 35358 (-)
Type: TC
Location: 34024 - 35358 (-)
Gene ID: HRGMv2_2037_16_32
Type: TC
Location: 35393 - 37012 (-)
Type: TC
Location: 35393 - 37012 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp905214955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.