Cluster: HRGMv2_2037_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2037
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2037_13 | HRGMv2_2037_13_34 | 36281 | 37519 | + | 9.B.14.1.13 |
| TF | HRGMv2_2037_13 | HRGMv2_2037_13_35 | 37677 | 38402 | + | LytTR |
| STP | HRGMv2_2037_13 | HRGMv2_2037_13_36 | 38412 | 39725 | - | AAA |
| CAZyme | HRGMv2_2037_13 | HRGMv2_2037_13_37 | 39741 | 40478 | - | CE4 |
| pfam | HRGMv2_2037_13 | HRGMv2_2037_13_38 | 40521 | 42074 | - | Fer2 | RACo_C_ter | Raco_middle |
| CAZyme | HRGMv2_2037_13 | HRGMv2_2037_13_39 | 42110 | 44269 | - | GH112 |
Gene ID: HRGMv2_2037_13_34
Type: TC
Location: 36281 - 37519 (+)
Type: TC
Location: 36281 - 37519 (+)
Gene ID: HRGMv2_2037_13_35
Type: TF
Location: 37677 - 38402 (+)
Type: TF
Location: 37677 - 38402 (+)
Gene ID: HRGMv2_2037_13_36
Type: STP
Location: 38412 - 39725 (-)
Type: STP
Location: 38412 - 39725 (-)
Gene ID: HRGMv2_2037_13_37
Type: CAZyme
Location: 39741 - 40478 (-)
Type: CAZyme
Location: 39741 - 40478 (-)
Gene ID: HRGMv2_2037_13_38
Type: pfam
Location: 40521 - 42074 (-)
Type: pfam
Location: 40521 - 42074 (-)
Gene ID: HRGMv2_2037_13_39
Type: CAZyme
Location: 42110 - 44269 (-)
Type: CAZyme
Location: 42110 - 44269 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp905214955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.