Cluster: HRGMv2_2037_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2037
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2037_10 | HRGMv2_2037_10_42 | 51147 | 52052 | + | 3.A.1.1.28 |
| TC | HRGMv2_2037_10 | HRGMv2_2037_10_43 | 52054 | 52920 | + | 3.A.1.1.41 |
| CAZyme | HRGMv2_2037_10 | HRGMv2_2037_10_44 | 52980 | 55001 | + | GH120 |
| CAZyme | HRGMv2_2037_10 | HRGMv2_2037_10_45 | 55074 | 57023 | + | GH120 |
| CAZyme | HRGMv2_2037_10 | HRGMv2_2037_10_46 | 57055 | 59130 | + | GH3 |
Gene ID: HRGMv2_2037_10_42
Type: TC
Location: 51147 - 52052 (+)
Type: TC
Location: 51147 - 52052 (+)
Gene ID: HRGMv2_2037_10_43
Type: TC
Location: 52054 - 52920 (+)
Type: TC
Location: 52054 - 52920 (+)
Gene ID: HRGMv2_2037_10_44
Type: CAZyme
Location: 52980 - 55001 (+)
Type: CAZyme
Location: 52980 - 55001 (+)
Gene ID: HRGMv2_2037_10_45
Type: CAZyme
Location: 55074 - 57023 (+)
Type: CAZyme
Location: 55074 - 57023 (+)
Gene ID: HRGMv2_2037_10_46
Type: CAZyme
Location: 57055 - 59130 (+)
Type: CAZyme
Location: 57055 - 59130 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp905214955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.