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Cluster: HRGMv2_2037_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2037_8 HRGMv2_2037_8_64 62122 63027 + 3.A.1.1.20
TC HRGMv2_2037_8 HRGMv2_2037_8_65 63050 63913 + 3.A.1.1.48
CAZyme HRGMv2_2037_8 HRGMv2_2037_8_66 63944 65245 + GH29
pfam HRGMv2_2037_8 HRGMv2_2037_8_67 65276 65743 + Ribonuc_L-PSP | YjgF_endoribonc
CAZyme HRGMv2_2037_8 HRGMv2_2037_8_68 65766 68159 + GH9
TC HRGMv2_2037_8 HRGMv2_2037_8_69 68191 69465 - 9.A.40.2.4
TC HRGMv2_2037_8 HRGMv2_2037_8_70 69630 70946 - 2.A.66.1.33
TC HRGMv2_2037_8 HRGMv2_2037_8_71 71247 73004 - 3.A.1.135.5
TC HRGMv2_2037_8 HRGMv2_2037_8_72 73001 74746 - 3.A.1.135.7
Gene ID: HRGMv2_2037_8_64
Type: TC
Location: 62122 - 63027 (+)
Gene ID: HRGMv2_2037_8_65
Type: TC
Location: 63050 - 63913 (+)
Gene ID: HRGMv2_2037_8_66
Type: CAZyme
Location: 63944 - 65245 (+)
Gene ID: HRGMv2_2037_8_67
Type: pfam
Location: 65276 - 65743 (+)
Gene ID: HRGMv2_2037_8_68
Type: CAZyme
Location: 65766 - 68159 (+)
Gene ID: HRGMv2_2037_8_69
Type: TC
Location: 68191 - 69465 (-)
Gene ID: HRGMv2_2037_8_70
Type: TC
Location: 69630 - 70946 (-)
Gene ID: HRGMv2_2037_8_71
Type: TC
Location: 71247 - 73004 (-)
Gene ID: HRGMv2_2037_8_72
Type: TC
Location: 73001 - 74746 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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