Cluster: HRGMv2_2037_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2037
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2037_8 | HRGMv2_2037_8_14 | 9629 | 11320 | + | GH18 |
| pfam | HRGMv2_2037_8 | HRGMv2_2037_8_15 | 11550 | 13163 | + | BD-FAE |
| TC | HRGMv2_2037_8 | HRGMv2_2037_8_16 | 13234 | 14013 | + | 2.A.79.1.5 |
| pfam | HRGMv2_2037_8 | HRGMv2_2037_8_17 | 14010 | 14447 | + | ThrE_2 |
| TC | HRGMv2_2037_8 | HRGMv2_2037_8_18 | 14450 | 15805 | - | 2.A.66.1.33 |
Gene ID: HRGMv2_2037_8_14
Type: CAZyme
Location: 9629 - 11320 (+)
Type: CAZyme
Location: 9629 - 11320 (+)
Gene ID: HRGMv2_2037_8_15
Type: pfam
Location: 11550 - 13163 (+)
Type: pfam
Location: 11550 - 13163 (+)
Gene ID: HRGMv2_2037_8_16
Type: TC
Location: 13234 - 14013 (+)
Type: TC
Location: 13234 - 14013 (+)
Gene ID: HRGMv2_2037_8_17
Type: pfam
Location: 14010 - 14447 (+)
Type: pfam
Location: 14010 - 14447 (+)
Gene ID: HRGMv2_2037_8_18
Type: TC
Location: 14450 - 15805 (-)
Type: TC
Location: 14450 - 15805 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp905214955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.