Cluster: HRGMv2_2037_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2037
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2037_7 | HRGMv2_2037_7_31 | 32407 | 32625 | - | 3.A.3.2.22 |
| NULL(UNKNOWN) | HRGMv2_2037_7 | HRGMv2_2037_7_32 | 32622 | 32756 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_2037_7 | HRGMv2_2037_7_33 | 33009 | 33809 | + | LytTR |
| TC | HRGMv2_2037_7 | HRGMv2_2037_7_34 | 34148 | 35521 | - | 2.A.22.5.3 |
| pfam | HRGMv2_2037_7 | HRGMv2_2037_7_35 | 35678 | 36784 | - | LytR_cpsA_psr |
| pfam | HRGMv2_2037_7 | HRGMv2_2037_7_36 | 36843 | 37229 | - | Trns_repr_metal |
| CAZyme | HRGMv2_2037_7 | HRGMv2_2037_7_37 | 37246 | 39636 | - | CBM48 | GH13_9 |
Gene ID: HRGMv2_2037_7_31
Type: TC
Location: 32407 - 32625 (-)
Type: TC
Location: 32407 - 32625 (-)
Gene ID: HRGMv2_2037_7_32
Type:
Location: 32622 - 32756 (-)
Type:
Location: 32622 - 32756 (-)
Gene ID: HRGMv2_2037_7_33
Type: TF
Location: 33009 - 33809 (+)
Type: TF
Location: 33009 - 33809 (+)
Gene ID: HRGMv2_2037_7_34
Type: TC
Location: 34148 - 35521 (-)
Type: TC
Location: 34148 - 35521 (-)
Gene ID: HRGMv2_2037_7_35
Type: pfam
Location: 35678 - 36784 (-)
Type: pfam
Location: 35678 - 36784 (-)
Gene ID: HRGMv2_2037_7_36
Type: pfam
Location: 36843 - 37229 (-)
Type: pfam
Location: 36843 - 37229 (-)
Gene ID: HRGMv2_2037_7_37
Type: CAZyme
Location: 37246 - 39636 (-)
Type: CAZyme
Location: 37246 - 39636 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp905214955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.