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Cluster: HRGMv2_2037_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2037_7 HRGMv2_2037_7_13 10808 11389 + 3.A.1.211.10
NULL(UNKNOWN) HRGMv2_2037_7 HRGMv2_2037_7_14 11396 12262 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2037_7 HRGMv2_2037_7_15 12383 13381 - 3.A.1.2.17
TC HRGMv2_2037_7 HRGMv2_2037_7_16 13374 14486 - 3.A.1.2.12
TC HRGMv2_2037_7 HRGMv2_2037_7_17 14483 16009 - 3.A.1.2.12
pfam HRGMv2_2037_7 HRGMv2_2037_7_18 16095 17291 - Bmp
NULL(UNKNOWN) HRGMv2_2037_7 HRGMv2_2037_7_19 17552 17668 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2037_7 HRGMv2_2037_7_20 17607 18698 - CE19
CAZyme HRGMv2_2037_7 HRGMv2_2037_7_21 18719 20272 - GH28
Gene ID: HRGMv2_2037_7_13
Type: TC
Location: 10808 - 11389 (+)
Gene ID: HRGMv2_2037_7_14
Type:
Location: 11396 - 12262 (-)
Gene ID: HRGMv2_2037_7_15
Type: TC
Location: 12383 - 13381 (-)
Gene ID: HRGMv2_2037_7_16
Type: TC
Location: 13374 - 14486 (-)
Gene ID: HRGMv2_2037_7_17
Type: TC
Location: 14483 - 16009 (-)
Gene ID: HRGMv2_2037_7_18
Type: pfam
Location: 16095 - 17291 (-)
Gene ID: HRGMv2_2037_7_19
Type:
Location: 17552 - 17668 (-)
Gene ID: HRGMv2_2037_7_20
Type: CAZyme
Location: 17607 - 18698 (-)
Gene ID: HRGMv2_2037_7_21
Type: CAZyme
Location: 18719 - 20272 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2037_7_15 vegetarian > vegan 1.02528 0.00141
HRGMv2_2037_7_18 vegetarian > vegan 1.69909 0.00141

🧭 Explore Read Mapping of CGC

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