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Cluster: HRGMv2_2037_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2037_6 HRGMv2_2037_6_29 30852 31847 - GT2
pfam HRGMv2_2037_6 HRGMv2_2037_6_30 31847 32296 - DUF2304
CAZyme HRGMv2_2037_6 HRGMv2_2037_6_31 32301 32999 - GT2
CAZyme HRGMv2_2037_6 HRGMv2_2037_6_32 33094 33993 - GT2
NULL(UNKNOWN) HRGMv2_2037_6 HRGMv2_2037_6_33 33998 35173 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2037_6 HRGMv2_2037_6_34 35185 37479 - GT2 | GT2
pfam HRGMv2_2037_6 HRGMv2_2037_6_35 37494 39389 - DUF2142
TC HRGMv2_2037_6 HRGMv2_2037_6_36 39392 40384 - 9.B.102.7.7
pfam HRGMv2_2037_6 HRGMv2_2037_6_37 40454 42787 - PS_pyruv_trans | FrhB_FdhB_N | FrhB_FdhB_C
CAZyme HRGMv2_2037_6 HRGMv2_2037_6_38 42784 43764 - GT2
Gene ID: HRGMv2_2037_6_29
Type: CAZyme
Location: 30852 - 31847 (-)
Gene ID: HRGMv2_2037_6_30
Type: pfam
Location: 31847 - 32296 (-)
Gene ID: HRGMv2_2037_6_31
Type: CAZyme
Location: 32301 - 32999 (-)
Gene ID: HRGMv2_2037_6_32
Type: CAZyme
Location: 33094 - 33993 (-)
Gene ID: HRGMv2_2037_6_33
Type:
Location: 33998 - 35173 (-)
Gene ID: HRGMv2_2037_6_34
Type: CAZyme
Location: 35185 - 37479 (-)
Gene ID: HRGMv2_2037_6_35
Type: pfam
Location: 37494 - 39389 (-)
Gene ID: HRGMv2_2037_6_36
Type: TC
Location: 39392 - 40384 (-)
Gene ID: HRGMv2_2037_6_37
Type: pfam
Location: 40454 - 42787 (-)
Gene ID: HRGMv2_2037_6_38
Type: CAZyme
Location: 42784 - 43764 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2037_6_38 vegan > omnivore 1.05781 0.01057

🧭 Explore Read Mapping of CGC

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