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Cluster: HRGMv2_2037_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2037_5 HRGMv2_2037_5_26 24580 25752 + GH88
TF HRGMv2_2037_5 HRGMv2_2037_5_27 25810 26484 - GntR
peptidase HRGMv2_2037_5 HRGMv2_2037_5_28 26874 27884 + M42.UPW
TC HRGMv2_2037_5 HRGMv2_2037_5_29 27918 29414 + 3.A.1.5.27
TC HRGMv2_2037_5 HRGMv2_2037_5_30 29562 30512 + 3.A.1.5.11
TC HRGMv2_2037_5 HRGMv2_2037_5_31 30505 31389 + 3.A.1.5.39
TC HRGMv2_2037_5 HRGMv2_2037_5_32 31429 32463 + 3.A.1.5.2
TC HRGMv2_2037_5 HRGMv2_2037_5_33 32460 33437 + 3.A.1.5.20
Gene ID: HRGMv2_2037_5_26
Type: CAZyme
Location: 24580 - 25752 (+)
Gene ID: HRGMv2_2037_5_27
Type: TF
Location: 25810 - 26484 (-)
Gene ID: HRGMv2_2037_5_28
Type: peptidase
Location: 26874 - 27884 (+)
Gene ID: HRGMv2_2037_5_29
Type: TC
Location: 27918 - 29414 (+)
Gene ID: HRGMv2_2037_5_30
Type: TC
Location: 29562 - 30512 (+)
Gene ID: HRGMv2_2037_5_31
Type: TC
Location: 30505 - 31389 (+)
Gene ID: HRGMv2_2037_5_32
Type: TC
Location: 31429 - 32463 (+)
Gene ID: HRGMv2_2037_5_33
Type: TC
Location: 32460 - 33437 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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