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Cluster: HRGMv2_2037_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2037_5 HRGMv2_2037_5_4 1784 2455 + 9.A.11.1.1
TC HRGMv2_2037_5 HRGMv2_2037_5_5 2449 2862 + 9.A.11.1.1
TC HRGMv2_2037_5 HRGMv2_2037_5_6 2878 3345 + 9.A.11.1.1
TC HRGMv2_2037_5 HRGMv2_2037_5_7 3386 4411 + 9.A.11.1.1
pfam HRGMv2_2037_5 HRGMv2_2037_5_8 4439 4795 + SpoVAC_SpoVAEB
TC HRGMv2_2037_5 HRGMv2_2037_5_9 4916 6205 + 3.A.1.1.28
TC HRGMv2_2037_5 HRGMv2_2037_5_10 6285 7160 + 3.A.1.1.7
TC HRGMv2_2037_5 HRGMv2_2037_5_11 7160 7990 + 3.A.1.1.34
STP HRGMv2_2037_5 HRGMv2_2037_5_12 8007 9812 + HATPase_c
TF HRGMv2_2037_5 HRGMv2_2037_5_13 9787 11286 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_2037_5 HRGMv2_2037_5_14 11311 14505 + GH106
Gene ID: HRGMv2_2037_5_4
Type: TC
Location: 1784 - 2455 (+)
Gene ID: HRGMv2_2037_5_5
Type: TC
Location: 2449 - 2862 (+)
Gene ID: HRGMv2_2037_5_6
Type: TC
Location: 2878 - 3345 (+)
Gene ID: HRGMv2_2037_5_7
Type: TC
Location: 3386 - 4411 (+)
Gene ID: HRGMv2_2037_5_8
Type: pfam
Location: 4439 - 4795 (+)
Gene ID: HRGMv2_2037_5_9
Type: TC
Location: 4916 - 6205 (+)
Gene ID: HRGMv2_2037_5_10
Type: TC
Location: 6285 - 7160 (+)
Gene ID: HRGMv2_2037_5_11
Type: TC
Location: 7160 - 7990 (+)
Gene ID: HRGMv2_2037_5_12
Type: STP
Location: 8007 - 9812 (+)
Gene ID: HRGMv2_2037_5_13
Type: TF
Location: 9787 - 11286 (+)
Gene ID: HRGMv2_2037_5_14
Type: CAZyme
Location: 11311 - 14505 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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