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Cluster: HRGMv2_2011_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2011_4 HRGMv2_2011_4_115 106362 107294 + GT42
pfam HRGMv2_2011_4 HRGMv2_2011_4_116 107294 108469 + Methyltransf_11 | Methyltransf_23
CAZyme HRGMv2_2011_4 HRGMv2_2011_4_117 108472 109611 + GT2
CAZyme HRGMv2_2011_4 HRGMv2_2011_4_118 109604 111955 + GT2
NULL(UNKNOWN) HRGMv2_2011_4 HRGMv2_2011_4_119 111948 112976 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2011_4 HRGMv2_2011_4_120 112969 113973 + GT2
TC HRGMv2_2011_4 HRGMv2_2011_4_121 113970 115598 - 2.A.53.3.3
Gene ID: HRGMv2_2011_4_115
Type: CAZyme
Location: 106362 - 107294 (+)
Gene ID: HRGMv2_2011_4_116
Type: pfam
Location: 107294 - 108469 (+)
Gene ID: HRGMv2_2011_4_117
Type: CAZyme
Location: 108472 - 109611 (+)
Gene ID: HRGMv2_2011_4_118
Type: CAZyme
Location: 109604 - 111955 (+)
Gene ID: HRGMv2_2011_4_119
Type:
Location: 111948 - 112976 (+)
Gene ID: HRGMv2_2011_4_120
Type: CAZyme
Location: 112969 - 113973 (+)
Gene ID: HRGMv2_2011_4_121
Type: TC
Location: 113970 - 115598 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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