PROTEIN: HRGMv2_2011_4_119
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Protein File & Metadata
Source:
HRGMv2_2011_4_119.pdb
Genome ID:
Protein ID:
HRGMv2_2011_4_119
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Protein Sequence
MLKLLKIEFS LKKLFYNVYY LFCKKKRRNK RNKLNAKYMQ KLVSYIENRY KDYYILLPHF 60 PIGDTLIVLG LIPEFINKYG KKVLILVHNE SRKDFINLFQ LPVEILNLDI SLDNMYYLLS 120 TLPVSLARGK VHPLLTDRTK IEKNIIIKNA IDLYAYLMDI NPQKFYLKNL SKTTPQITDQ 180 VFLIPYANSF NDKVISKTFW LKLAQELEKQ GLKVIFNTKE GDFEDYECKL LPFDKVGEFA 240 SKCKAVIAFR SGITDLIAQY NINKFITIYS EDMANKNMDL KYWYKLQKQT YYFDNQLSNA 300 QNIFNIWALC KLWKKDDIIE MTTNGDEDKL LKTILEAVFK DD 342
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A8F9XMW1 | GT0 | 12 | 342 | 10 | 313 | 0.5967 |
0.678 |
| AF-A0A5Q2QDJ9-F1-model_v4 | GT9 | 52 | 342 | 1 | 325 | 0.5926 |
0.6932 |
| AF-D2C195-F1-model_v4 | GT9 | 9 | 342 | 1 | 366 | 0.5919 |
0.6488 |
| AF-E8X141-F1-model_v4 | GT9 | 52 | 342 | 5 | 333 | 0.5832 |
0.6965 |
| AF-D8K9U4-F1-model_v4 | GT9 | 52 | 342 | 2 | 301 | 0.574 |
0.6538 |
| AF-Q13AN9-F1-model_v4 | GT9 | 52 | 342 | 20 | 351 | 0.5719 |
0.6971 |
| AF-A0A1U9KK68-F1-model_v4 | GT112 | 52 | 342 | 53 | 350 | 0.5536 |
0.668 |
| UWE15212.1 | GT9 | 52 | 342 | 52 | 412 | 0.5509 |
0.7118 |
| AF-Q5FS75-F1-model_v4 | GT112 | 52 | 342 | 53 | 347 | 0.5471 |
0.6604 |
| AF-A0A1D6X6B4-F1-model_v4 | GT112 | 52 | 342 | 31 | 327 | 0.5364 |
0.6562 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7S7NLB4 | GT9 | 52 | 342 | 2 | 257 | 0.6021 |
0.7199 |
| A0A5Q2QDJ9 | GT9 | 52 | 342 | 1 | 325 | 0.5926 |
0.6932 |
| A0A975IFX2 | GT9 | 14 | 342 | 1 | 367 | 0.5917 |
0.661 |
| Q9K383 | GT9 | 51 | 342 | 26 | 343 | 0.5891 |
0.7042 |
| A0A4P7BZR0 | GT9 | 51 | 342 | 9 | 358 | 0.5713 |
0.704 |
| J9YZI1 | GT9 | 52 | 342 | 1 | 304 | 0.5702 |
0.6525 |
| A0A0H3A896 | GT9 | 50 | 342 | 49 | 358 | 0.57 |
0.6929 |
| A0A5B8CYK3 | GT9 | 51 | 342 | 46 | 352 | 0.5664 |
0.6861 |
| BDU16266.1 | GT9 | 51 | 342 | 30 | 331 | 0.5653 |
0.665 |
| A0A2Z3QVK3 | GT9 | 23 | 342 | 1 | 371 | 0.5608 |
0.6428 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4rap-assembly1.cif.gz_D | 42 | 342 | 1 | 380 | 0.5425 |
0.6598 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9S4K6-F1-model_v4 | 8 | 342 | 1 | 392 | 0.542 |
0.6159 |