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Cluster: HRGMv2_1966_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1966_176 HRGMv2_1966_176_5 5961 7346 - GT5
pfam HRGMv2_1966_176 HRGMv2_1966_176_6 7362 8525 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_1966_176 HRGMv2_1966_176_7 8543 9676 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_1966_176 HRGMv2_1966_176_8 9679 11517 - CBM48 | GH13_9
CAZyme HRGMv2_1966_176 HRGMv2_1966_176_9 11545 13911 - GT35
CAZyme HRGMv2_1966_176 HRGMv2_1966_176_10 13926 15422 - GH77
pfam HRGMv2_1966_176 HRGMv2_1966_176_11 15610 16371 - DUF1963
NULL(UNKNOWN) HRGMv2_1966_176 HRGMv2_1966_176_12 16383 17159 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1966_176 HRGMv2_1966_176_13 17178 17864 - 1.A.14.2.2
TC HRGMv2_1966_176 HRGMv2_1966_176_14 17889 20399 - 4.C.1.1.7
Gene ID: HRGMv2_1966_176_5
Type: CAZyme
Location: 5961 - 7346 (-)
Gene ID: HRGMv2_1966_176_6
Type: pfam
Location: 7362 - 8525 (-)
Gene ID: HRGMv2_1966_176_7
Type: pfam
Location: 8543 - 9676 (-)
Gene ID: HRGMv2_1966_176_8
Type: CAZyme
Location: 9679 - 11517 (-)
Gene ID: HRGMv2_1966_176_9
Type: CAZyme
Location: 11545 - 13911 (-)
Gene ID: HRGMv2_1966_176_10
Type: CAZyme
Location: 13926 - 15422 (-)
Gene ID: HRGMv2_1966_176_11
Type: pfam
Location: 15610 - 16371 (-)
Gene ID: HRGMv2_1966_176_12
Type:
Location: 16383 - 17159 (-)
Gene ID: HRGMv2_1966_176_13
Type: TC
Location: 17178 - 17864 (-)
Gene ID: HRGMv2_1966_176_14
Type: TC
Location: 17889 - 20399 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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