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PROTEIN: HRGMv2_1966_176_12

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_1966_176_12.pdb
Genome ID:
HRGMv2_1966
Protein ID:
HRGMv2_1966_176_12

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKIILLMFS   VLCVNSFSYV   ERNEQVGNRG   LELMRESNIN   QNAGLSKESG   STQIIDAYAG 60
NGKFSKTKGF   MIGTTSNLVA   YPNITAGVTV   AYDKYKYKPG   SNDYWGRDYD   LNTYFSYKLD 120
KNLFTLGFGY   SQSRHVEKRA   YTGNLEYGRF   LTPSTYLYTG   IEGQNRNYKN   SEDLNFVNYK 180
VGVLRQDTWK   KMKFVNGVEF   NKDNKKYDRE   ERGRGNVTFV   SRASYYIYDD   LLFDVQYRGT 240
KNSKFYDNVV   GIGFTHYF 258
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P76773-F1-model_v4 40 258 12 230 0.6932 0.7864
AF-Q9L7R3-F1-model_v4 40 258 13 230 0.6903 0.7863
AF-A0A0H3GX63-F1-model_v4 47 258 17 231 0.689 0.8072
AF-P0A1U8-F1-model_v4 36 258 12 227 0.6852 0.7869
AF-Q8ZQ33-F1-model_v4 49 256 19 230 0.6837 0.8118
AF-A0A0H3GU82-F1-model_v4 18 258 11 241 0.6755 0.7499
AF-Q9HTN0-F1-model_v4 17 258 25 314 0.663 0.7957
AF-P76206-F1-model_v4 13 258 17 252 0.6542 0.7302
AF-Q8ZPT4-F1-model_v4 13 258 17 252 0.65 0.7257
AF-Q8ZM77-F1-model_v4 5 258 9 297 0.6399 0.7176
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A222P7K1-F1-model_v4 GH135 1 258 10 707 0.5583 0.8253
AF-A0A510K0F4-F1-model_v4 GH135 5 258 79 765 0.5533 0.8462
WBT40087.1 GT4 3 258 62 1347 0.5223 0.8926
AF-Q9EZV7-F1-model_v4 GH33 18 258 788 1070 0.5183 0.899
AF-Q9CM43-F1-model_v4 GH33 11 258 700 1080 0.5174 0.8746
Q9CM43 GH33 11 258 700 1080 0.5174 0.8746
AF-B8F765-F1-model_v4 GH33 19 258 435 668 0.4972 0.7924
CCP92293.1 GT19 1 258 15 1617 0.4769 0.833
AF-I7AJR2-F1-model_v4 GH33 19 258 570 803 0.4747 0.794
AF-A0A806J6M7-F1-model_v4 GH33 19 258 570 803 0.4735 0.7919
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A222P7K1 GH135 1 258 10 707 0.5583 0.8253
A0A510K0F4 GH135 5 258 79 765 0.5533 0.8462
WBT40087.1 GT4 3 258 62 1347 0.5223 0.8926
Q9CM43 GH33 11 258 700 1080 0.5174 0.8746
CCP92293.1 GT19 1 258 15 1617 0.4769 0.833
Q9CMY7 GH33 19 258 595 832 0.4731 0.7854
A0A011P926 CBM40 , GH33 18 258 1341 1627 0.4723 0.8797
A0A7Z8R7E2 GH43_19 18 258 822 1105 0.4642 0.8114
D0ZDR7 GH3 17 258 1349 1651 0.4626 0.86
A0A6G8J7C0 CBM40 , GH33 18 258 1319 1608 0.4571 0.852
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
1uyn-assembly1.cif.gz_X 18 258 10 279 0.7722 0.8722
1uyo-assembly1.cif.gz_X 18 258 11 277 0.7639 0.8615
4pr7-assembly1.cif.gz_A 53 257 1 171 0.7461 0.9134
3slj-assembly1.cif.gz_A 18 258 17 305 0.6846 0.8122
3slo-assembly1.cif.gz_A 18 258 18 306 0.6833 0.8119
3slt-assembly1.cif.gz_A 18 258 17 305 0.683 0.8105
2qom-assembly1.cif.gz_A 28 258 1 264 0.6805 0.7915
3aeh-assembly2.cif.gz_B 19 258 22 275 0.678 0.7771
4mee-assembly1.cif.gz_A 18 258 10 302 0.6773 0.8012
5o68-assembly4.cif.gz_K 32 258 8 272 0.6722 0.8008
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8X8F2-F1-model_v4 40 258 12 230 0.6956 0.7886
AF-P76773-F1-model_v4 40 258 12 230 0.6932 0.7864
AF-Q8Z2T0-F1-model_v4 40 258 12 230 0.6926 0.7854
AF-Q5PKD5-F1-model_v4 41 258 13 230 0.6908 0.7867
AF-Q9L7R3-F1-model_v4 40 258 13 230 0.6903 0.7863
AF-P0A1U8-F1-model_v4 36 258 12 227 0.6852 0.7869
AF-Q934G3-F1-model_v4 49 256 17 236 0.662 0.7972
AF-P0A1U9-F1-model_v4 47 258 18 227 0.6577 0.7758
AF-P76206-F1-model_v4 13 258 17 252 0.6542 0.7302
AF-P77286-F1-model_v4 18 258 149 465 0.5811 0.8072
Download Full SwissProt Results