Cluster: HRGMv2_1953_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1953
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1953_23 | HRGMv2_1953_23_5 | 3339 | 4301 | - | CE7 |
| TC | HRGMv2_1953_23 | HRGMv2_1953_23_6 | 4323 | 6176 | - | 2.A.56.1.3 |
| TC | HRGMv2_1953_23 | HRGMv2_1953_23_7 | 6210 | 7202 | - | 2.A.56.1.3 |
Gene ID: HRGMv2_1953_23_5
Type: CAZyme
Location: 3339 - 4301 (-)
Type: CAZyme
Location: 3339 - 4301 (-)
Gene ID: HRGMv2_1953_23_6
Type: TC
Location: 4323 - 6176 (-)
Type: TC
Location: 4323 - 6176 (-)
Gene ID: HRGMv2_1953_23_7
Type: TC
Location: 6210 - 7202 (-)
Type: TC
Location: 6210 - 7202 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A ulcerans_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.