Cluster: HRGMv2_1953_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1953
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1953_17 | HRGMv2_1953_17_3 | 2180 | 3268 | + | 9.B.146.1.3 |
| pfam | HRGMv2_1953_17 | HRGMv2_1953_17_4 | 3338 | 4645 | + | Mur_ligase_M |
| CAZyme | HRGMv2_1953_17 | HRGMv2_1953_17_5 | 4642 | 5718 | + | GT28 |
Gene ID: HRGMv2_1953_17_3
Type: TC
Location: 2180 - 3268 (+)
Type: TC
Location: 2180 - 3268 (+)
Gene ID: HRGMv2_1953_17_4
Type: pfam
Location: 3338 - 4645 (+)
Type: pfam
Location: 3338 - 4645 (+)
Gene ID: HRGMv2_1953_17_5
Type: CAZyme
Location: 4642 - 5718 (+)
Type: CAZyme
Location: 4642 - 5718 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A ulcerans_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.