Cluster: HRGMv2_1953_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1953
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1953_164 | HRGMv2_1953_164_1 | 3 | 773 | + | 9.B.18.1.3 |
| CAZyme | HRGMv2_1953_164 | HRGMv2_1953_164_2 | 776 | 1990 | + | GT4 |
| TC | HRGMv2_1953_164 | HRGMv2_1953_164_3 | 2004 | 3029 | + | 9.B.18.2.1 |
Gene ID: HRGMv2_1953_164_1
Type: TC
Location: 3 - 773 (+)
Type: TC
Location: 3 - 773 (+)
Gene ID: HRGMv2_1953_164_2
Type: CAZyme
Location: 776 - 1990 (+)
Type: CAZyme
Location: 776 - 1990 (+)
Gene ID: HRGMv2_1953_164_3
Type: TC
Location: 2004 - 3029 (+)
Type: TC
Location: 2004 - 3029 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A ulcerans_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.