Cluster: HRGMv2_1953_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1953
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1953_107 | HRGMv2_1953_107_5 | 3900 | 6071 | + | GT51 |
| STP | HRGMv2_1953_107 | HRGMv2_1953_107_6 | 6263 | 6769 | - | GAF |
| NULL(UNKNOWN) | HRGMv2_1953_107 | HRGMv2_1953_107_7 | 6780 | 6974 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1953_107 | HRGMv2_1953_107_8 | 6986 | 7630 | - | 9.B.143.3.2 |
Gene ID: HRGMv2_1953_107_5
Type: CAZyme
Location: 3900 - 6071 (+)
Type: CAZyme
Location: 3900 - 6071 (+)
Gene ID: HRGMv2_1953_107_6
Type: STP
Location: 6263 - 6769 (-)
Type: STP
Location: 6263 - 6769 (-)
Gene ID: HRGMv2_1953_107_7
Type:
Location: 6780 - 6974 (-)
Type:
Location: 6780 - 6974 (-)
Gene ID: HRGMv2_1953_107_8
Type: TC
Location: 6986 - 7630 (-)
Type: TC
Location: 6986 - 7630 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A ulcerans_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.