Cluster: HRGMv2_1953_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1953
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1953_65 | HRGMv2_1953_65_9 | 10220 | 11782 | + | 3.A.1.1.10 |
| sulfatase | HRGMv2_1953_65 | HRGMv2_1953_65_10 | 12182 | 13594 | + | S1_27 |
| CAZyme | HRGMv2_1953_65 | HRGMv2_1953_65_11 | 13625 | 14815 | + | GH88 |
| TC | HRGMv2_1953_65 | HRGMv2_1953_65_12 | 14859 | 16280 | + | 2.A.2.3.2 |
Gene ID: HRGMv2_1953_65_9
Type: TC
Location: 10220 - 11782 (+)
Type: TC
Location: 10220 - 11782 (+)
Gene ID: HRGMv2_1953_65_10
Type: sulfatase
Location: 12182 - 13594 (+)
Type: sulfatase
Location: 12182 - 13594 (+)
Gene ID: HRGMv2_1953_65_11
Type: CAZyme
Location: 13625 - 14815 (+)
Type: CAZyme
Location: 13625 - 14815 (+)
Gene ID: HRGMv2_1953_65_12
Type: TC
Location: 14859 - 16280 (+)
Type: TC
Location: 14859 - 16280 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A ulcerans_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.