Cluster: HRGMv2_1953_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1953
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1953_61 | HRGMv2_1953_61_2 | 597 | 1358 | - | GH73 |
| NULL(UNKNOWN) | HRGMv2_1953_61 | HRGMv2_1953_61_3 | 1476 | 3329 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_1953_61 | HRGMv2_1953_61_4 | 3587 | 4297 | + | Pirin | Pirin_C_2 |
| TC | HRGMv2_1953_61 | HRGMv2_1953_61_5 | 4397 | 5803 | + | 2.A.66.1.45 |
Gene ID: HRGMv2_1953_61_2
Type: CAZyme
Location: 597 - 1358 (-)
Type: CAZyme
Location: 597 - 1358 (-)
Gene ID: HRGMv2_1953_61_3
Type:
Location: 1476 - 3329 (-)
Type:
Location: 1476 - 3329 (-)
Gene ID: HRGMv2_1953_61_4
Type: pfam
Location: 3587 - 4297 (+)
Type: pfam
Location: 3587 - 4297 (+)
Gene ID: HRGMv2_1953_61_5
Type: TC
Location: 4397 - 5803 (+)
Type: TC
Location: 4397 - 5803 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A ulcerans_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.