Cluster: HRGMv2_1953_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1953
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1953_30 | HRGMv2_1953_30_4 | 3715 | 4404 | - | 3.A.1.125.1 |
| TC | HRGMv2_1953_30 | HRGMv2_1953_30_5 | 4397 | 5560 | - | 3.A.1.125.5 |
| CAZyme | HRGMv2_1953_30 | HRGMv2_1953_30_6 | 5562 | 7838 | - | GT51 |
| peptidase | HRGMv2_1953_30 | HRGMv2_1953_30_7 | 7838 | 12691 | - | I39.UPW |
| TC | HRGMv2_1953_30 | HRGMv2_1953_30_8 | 12710 | 14626 | - | 2.A.16.2.2 |
Gene ID: HRGMv2_1953_30_4
Type: TC
Location: 3715 - 4404 (-)
Type: TC
Location: 3715 - 4404 (-)
Gene ID: HRGMv2_1953_30_5
Type: TC
Location: 4397 - 5560 (-)
Type: TC
Location: 4397 - 5560 (-)
Gene ID: HRGMv2_1953_30_6
Type: CAZyme
Location: 5562 - 7838 (-)
Type: CAZyme
Location: 5562 - 7838 (-)
Gene ID: HRGMv2_1953_30_7
Type: peptidase
Location: 7838 - 12691 (-)
Type: peptidase
Location: 7838 - 12691 (-)
Gene ID: HRGMv2_1953_30_8
Type: TC
Location: 12710 - 14626 (-)
Type: TC
Location: 12710 - 14626 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A ulcerans_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.