Cluster: HRGMv2_1946_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1946
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1946_4 | HRGMv2_1946_4_246 | 263187 | 264221 | + | GT9 |
| TC | HRGMv2_1946_4 | HRGMv2_1946_4_247 | 264300 | 266822 | - | 3.A.9.1.2 |
| pfam | HRGMv2_1946_4 | HRGMv2_1946_4_248 | 266998 | 268095 | - | DUF4465 |
| pfam | HRGMv2_1946_4 | HRGMv2_1946_4_249 | 268330 | 268908 | + | HupE_UreJ_2 |
| TC | HRGMv2_1946_4 | HRGMv2_1946_4_250 | 268919 | 269356 | + | 3.A.11.1.4 |
Gene ID: HRGMv2_1946_4_246
Type: CAZyme
Location: 263187 - 264221 (+)
Type: CAZyme
Location: 263187 - 264221 (+)
Gene ID: HRGMv2_1946_4_247
Type: TC
Location: 264300 - 266822 (-)
Type: TC
Location: 264300 - 266822 (-)
Gene ID: HRGMv2_1946_4_248
Type: pfam
Location: 266998 - 268095 (-)
Type: pfam
Location: 266998 - 268095 (-)
Gene ID: HRGMv2_1946_4_249
Type: pfam
Location: 268330 - 268908 (+)
Type: pfam
Location: 268330 - 268908 (+)
Gene ID: HRGMv2_1946_4_250
Type: TC
Location: 268919 - 269356 (+)
Type: TC
Location: 268919 - 269356 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
UBA1820
Genus
Merdimorpha
Species
Merdimorpha sp003150615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1946_4_250 | omnivore > vegetarian | 19.38692 | 0.03894 |
| HRGMv2_1946_4_250 | vegan > vegetarian | 18.86773 | 0.03894 |