Cluster: HRGMv2_1939_CGC1
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1939
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1939_2 | HRGMv2_1939_2_40 | 50376 | 51959 | + | 3.A.1.5.27 |
| pfam | HRGMv2_1939_2 | HRGMv2_1939_2_41 | 52276 | 52608 | - | PemK_toxin |
| NULL(UNKNOWN) | HRGMv2_1939_2 | HRGMv2_1939_2_42 | 52602 | 52850 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1939_2 | HRGMv2_1939_2_43 | 54397 | 55872 | - | 2.A.66.2.16 |
| pfam | HRGMv2_1939_2 | HRGMv2_1939_2_44 | 55969 | 56925 | - | TOD1_MUCI70 |
| NULL(UNKNOWN) | HRGMv2_1939_2 | HRGMv2_1939_2_45 | 56930 | 58240 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1939_2 | HRGMv2_1939_2_46 | 58257 | 59189 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_1939_2 | HRGMv2_1939_2_47 | 59198 | 59992 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_1939_2 | HRGMv2_1939_2_48 | 60141 | 60632 | - | Hexapep |
| CAZyme | HRGMv2_1939_2 | HRGMv2_1939_2_49 | 60651 | 61466 | - | GT2 |
| pfam | HRGMv2_1939_2 | HRGMv2_1939_2_50 | 61476 | 62402 | - | Aminotran_4 |
| TC | HRGMv2_1939_2 | HRGMv2_1939_2_51 | 62431 | 63114 | - | 9.B.18.1.2 |
Gene ID: HRGMv2_1939_2_40
Type: TC
Location: 50376 - 51959 (+)
Type: TC
Location: 50376 - 51959 (+)
Gene ID: HRGMv2_1939_2_41
Type: pfam
Location: 52276 - 52608 (-)
Type: pfam
Location: 52276 - 52608 (-)
Gene ID: HRGMv2_1939_2_42
Type:
Location: 52602 - 52850 (-)
Type:
Location: 52602 - 52850 (-)
Gene ID: HRGMv2_1939_2_43
Type: TC
Location: 54397 - 55872 (-)
Type: TC
Location: 54397 - 55872 (-)
Gene ID: HRGMv2_1939_2_44
Type: pfam
Location: 55969 - 56925 (-)
Type: pfam
Location: 55969 - 56925 (-)
Gene ID: HRGMv2_1939_2_45
Type:
Location: 56930 - 58240 (-)
Type:
Location: 56930 - 58240 (-)
Gene ID: HRGMv2_1939_2_46
Type: CAZyme
Location: 58257 - 59189 (-)
Type: CAZyme
Location: 58257 - 59189 (-)
Gene ID: HRGMv2_1939_2_47
Type:
Location: 59198 - 59992 (-)
Type:
Location: 59198 - 59992 (-)
Gene ID: HRGMv2_1939_2_48
Type: pfam
Location: 60141 - 60632 (-)
Type: pfam
Location: 60141 - 60632 (-)
Gene ID: HRGMv2_1939_2_49
Type: CAZyme
Location: 60651 - 61466 (-)
Type: CAZyme
Location: 60651 - 61466 (-)
Gene ID: HRGMv2_1939_2_50
Type: pfam
Location: 61476 - 62402 (-)
Type: pfam
Location: 61476 - 62402 (-)
Gene ID: HRGMv2_1939_2_51
Type: TC
Location: 62431 - 63114 (-)
Type: TC
Location: 62431 - 63114 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Eubacteriaceae
Genus
Eubacterium
Species
Eubacterium callanderi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.