PROTEIN: HRGMv2_1939_2_47
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Protein File & Metadata
Source:
HRGMv2_1939_2_47.pdb
Genome ID:
Protein ID:
HRGMv2_1939_2_47
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Protein Sequence
MECVIVLMTH SSYVDICDNF VSLLHKNWPD CPFKVVGAVI GENRCIQGID TIYVDTNEKL 60 TDCIKAVMKE HEADYYMCFL GDAFISSRVC NDQVFALLNE IKEKEANYCK IIPMKKDSNN 120 HYPNNIRNIR KKDVYAHTFV AFIATRIFVE TELIGTTDFE FEKKYLEIAA SSMDNGVFPD 180 HFVVVKNIFH IIPAIVKGKW DRLALKSLEH NNPEIFFSNR DKLGLRDQCK LIVISMIEGM 240 VPSKSRKKLK KFLSSIGIKF VTDK 264
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q48215-F1-model_v4 | 1 | 260 | 1 | 258 | 0.5768 |
0.6188 |
| AF-K0EVS3-F1-model_v4 | 1 | 258 | 2 | 266 | 0.5666 |
0.6208 |
| AF-H9L470-F1-model_v4 | 1 | 259 | 1 | 243 | 0.5642 |
0.6204 |
| AF-A0A1C1CPQ1-F1-model_v4 | 1 | 244 | 9 | 347 | 0.5591 |
0.7 |
| AF-A0A0D2G6B1-F1-model_v4 | 1 | 244 | 9 | 349 | 0.5582 |
0.7013 |
| AF-Q9VIU7-F1-model_v4 | 1 | 264 | 6 | 231 | 0.5549 |
0.6399 |
| AF-G4VIT8-F1-model_v4 | 1 | 264 | 2 | 228 | 0.5532 |
0.6316 |
| AF-Q48214-F1-model_v4 | 2 | 260 | 1 | 286 | 0.5518 |
0.6132 |
| AF-O24928-F1-model_v4 | 1 | 253 | 1 | 243 | 0.5514 |
0.6157 |
| AF-O14466-F1-model_v4 | 1 | 264 | 2 | 225 | 0.5509 |
0.635 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6I4HVP9-F1-model_v4 | GT2 | 1 | 264 | 7 | 257 | 0.6072 |
0.662 |
| AF-A0A6I4I4J3-F1-model_v4 | GT2 | 1 | 264 | 7 | 256 | 0.6071 |
0.6635 |
| AF-A0A1H1VV24-F1-model_v4 | GT2 | 1 | 250 | 5 | 243 | 0.6053 |
0.6864 |
| AF-W0EX95-F1-model_v4 | GT2 | 1 | 264 | 5 | 251 | 0.6034 |
0.6612 |
| AF-A0A127V7G3-F1-model_v4 | GT2 | 1 | 264 | 9 | 259 | 0.6033 |
0.6583 |
| AF-A0A514ZYU9-F1-model_v4 | GT2 | 1 | 262 | 8 | 249 | 0.6031 |
0.6721 |
| AF-A0A2K8Z7B4-F1-model_v4 | GT2 | 1 | 251 | 6 | 242 | 0.6021 |
0.6829 |
| AF-A0A7G7G5C0-F1-model_v4 | GT2 | 1 | 264 | 9 | 255 | 0.6017 |
0.665 |
| AF-A0A5C0ZRT4-F1-model_v4 | GT2 | 1 | 264 | 5 | 249 | 0.6013 |
0.6668 |
| AF-A0A7L7LG22-F1-model_v4 | GT2 | 1 | 251 | 8 | 245 | 0.6013 |
0.6844 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0U2V473 | GT2 | 1 | 222 | 2 | 192 | 0.6183 |
0.7406 |
| A0A223KME2 | GT2 | 2 | 240 | 1 | 221 | 0.5974 |
0.694 |
| UBM60722.1 | GT2 | 1 | 251 | 6 | 241 | 0.5965 |
0.686 |
| A0A1N7REQ1 | GT2 | 1 | 252 | 9 | 244 | 0.5957 |
0.6877 |
| A0A127VIX2 | GT2 | 1 | 248 | 3 | 240 | 0.5948 |
0.6636 |
| A0A346A2I4 | GT2 | 2 | 195 | 1 | 191 | 0.5943 |
0.712 |
| A0A0P0CK37 | GT2 | 1 | 252 | 11 | 249 | 0.5942 |
0.6837 |
| A0A6M3KCV1 | GT2 | 2 | 264 | 1 | 198 | 0.5916 |
0.7183 |
| W8KNK5 | GT2 | 1 | 260 | 6 | 243 | 0.5897 |
0.6575 |
| A1AUG4 | GT2 | 1 | 264 | 7 | 277 | 0.5884 |
0.638 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2y6p-assembly2.cif.gz_C-2 | 2 | 212 | 1 | 229 | 0.5779 |
0.6886 |
| 1gq9-assembly1.cif.gz_B | 1 | 213 | 1 | 241 | 0.5737 |
0.694 |
| 6oew-assembly1.cif.gz_A | 1 | 233 | 2 | 237 | 0.5672 |
0.6327 |
| 1h7q-assembly1.cif.gz_A | 1 | 264 | 1 | 229 | 0.5497 |
0.6245 |
| 2e3d-assembly1.cif.gz_B | 1 | 215 | 2 | 267 | 0.5485 |
0.7025 |
| 1qgs-assembly1.cif.gz_A | 1 | 264 | 1 | 227 | 0.5481 |
0.6255 |
| 4ayj-assembly1.cif.gz_A | 1 | 223 | 1 | 231 | 0.5476 |
0.6254 |
| 1h7l-assembly1.cif.gz_A | 1 | 243 | 1 | 230 | 0.5432 |
0.6132 |
| 2apc-assembly1.cif.gz_A | 1 | 264 | 1 | 342 | 0.54 |
0.6261 |
| 8cvz-assembly1.cif.gz_J | 1 | 219 | 1 | 253 | 0.5395 |
0.6591 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q03084-F1-model_v4 | 1 | 259 | 6 | 264 | 0.5802 |
0.6273 |
| AF-P42216-F1-model_v4 | 1 | 215 | 2 | 245 | 0.5798 |
0.701 |
| AF-Q48215-F1-model_v4 | 1 | 260 | 1 | 258 | 0.5768 |
0.6188 |
| AF-A5FBA3-F1-model_v4 | 1 | 215 | 1 | 244 | 0.5603 |
0.6779 |
| AF-O32268-F1-model_v4 | 1 | 258 | 6 | 251 | 0.5564 |
0.6073 |
| AF-Q077R2-F1-model_v4 | 1 | 251 | 2 | 238 | 0.5556 |
0.625 |
| AF-Q9VIU7-F1-model_v4 | 1 | 264 | 6 | 231 | 0.5549 |
0.6399 |
| AF-P39614-F1-model_v4 | 1 | 242 | 1 | 248 | 0.5523 |
0.6258 |
| AF-Q48214-F1-model_v4 | 2 | 260 | 1 | 286 | 0.5518 |
0.6132 |
| AF-B5L3F2-F1-model_v4 | 1 | 254 | 3 | 244 | 0.5515 |
0.6131 |