Cluster: HRGMv2_1936_CGC33
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1936
- CGC Family ID: CGCFAM_03511
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1936_49 | HRGMv2_1936_49_4 | 2694 | 4130 | + | GH77 |
| pfam | HRGMv2_1936_49 | HRGMv2_1936_49_5 | 4133 | 5470 | + | Patatin |
| NULL(UNKNOWN) | HRGMv2_1936_49 | HRGMv2_1936_49_6 | 5457 | 6281 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1936_49 | HRGMv2_1936_49_7 | 6281 | 6934 | + | 2.A.115.2.9 |
| TC | HRGMv2_1936_49 | HRGMv2_1936_49_8 | 7000 | 7308 | + | 4.A.3.2.8 |
Gene ID: HRGMv2_1936_49_4
Type: CAZyme
Location: 2694 - 4130 (+)
Type: CAZyme
Location: 2694 - 4130 (+)
Gene ID: HRGMv2_1936_49_5
Type: pfam
Location: 4133 - 5470 (+)
Type: pfam
Location: 4133 - 5470 (+)
Gene ID: HRGMv2_1936_49_6
Type:
Location: 5457 - 6281 (+)
Type:
Location: 5457 - 6281 (+)
Gene ID: HRGMv2_1936_49_7
Type: TC
Location: 6281 - 6934 (+)
Type: TC
Location: 6281 - 6934 (+)
Gene ID: HRGMv2_1936_49_8
Type: TC
Location: 7000 - 7308 (+)
Type: TC
Location: 7000 - 7308 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.