PROTEIN: HRGMv2_1936_49_6
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Protein File & Metadata
Source:
HRGMv2_1936_49_6.pdb
Genome ID:
Protein ID:
HRGMv2_1936_49_6
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Protein Sequence
MNLIKKQCEK EDLDKVVSLM NEEIKKGTYL EEDTPITNDY IESFKYCGLI LDDQDLIGAY 60 FIDPMGNGHC KHIATCRYII KNKDDQEIVI KDSLEKAYKQ GFTIMQLNNV TKILKPAFDQ 120 LGFKTLGAIK DGYKKEDGYE NIYVLYRTLD DSILECKEKE DPISIEINHI SNSIQDRGIY 180 WIVSEVKHYR VKTKHAYSTF DYRDLHYQNE EDIKKFVESI FNKYYIKNES NQDTVHVLSV 240 HTSKDDAVAE WIKRDDLELQ KQMTSMHSFT KGAK 274
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FV98-F1-model_v4 | 4 | 152 | 1 | 163 | 0.6405 |
0.8895 |
| AF-Q8ZLG1-F1-model_v4 | 1 | 149 | 2 | 162 | 0.6375 |
0.8824 |
| AF-Q2G0E2-F1-model_v4 | 1 | 150 | 1 | 168 | 0.6356 |
0.8918 |
| AF-P46854-F1-model_v4 | 1 | 149 | 2 | 162 | 0.6348 |
0.8788 |
| AF-A0A0H3GYI4-F1-model_v4 | 4 | 149 | 1 | 158 | 0.6345 |
0.8826 |
| AF-Q9HUU7-F1-model_v4 | 1 | 151 | 1 | 167 | 0.6277 |
0.8868 |
| AF-Q9I2L2-F1-model_v4 | 1 | 154 | 2 | 177 | 0.6255 |
0.881 |
| AF-Q8DNF9-F1-model_v4 | 1 | 150 | 3 | 172 | 0.6254 |
0.889 |
| AF-Q8ZJW4-F1-model_v4 | 2 | 151 | 1 | 148 | 0.6251 |
0.8292 |
| AF-Q8ZPD3-F1-model_v4 | 3 | 151 | 1 | 164 | 0.6239 |
0.8892 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UGB46561.1 | GT0 | 2 | 158 | 367 | 537 | 0.3652 |
0.8048 |
| AF-A0A157S929-F1-model_v4 | GT0 | 1 | 155 | 367 | 532 | 0.3613 |
0.8072 |
| K2DQE5 | GT4 | 2 | 152 | 1 | 186 | 0.3495 |
0.8252 |
Structural Homologs -
CAZyme-ID50
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4h89-assembly1.cif.gz_A-2 | 1 | 149 | 1 | 168 | 0.6516 |
0.9195 |
| 2ge3-assembly1.cif.gz_B | 2 | 150 | 1 | 163 | 0.6399 |
0.8886 |
| 1vhs-assembly1.cif.gz_A | 2 | 151 | 1 | 165 | 0.6392 |
0.8884 |
| 3ld2-assembly3.cif.gz_C | 3 | 150 | 1 | 158 | 0.6391 |
0.8783 |
| 4mbu-assembly1.cif.gz_A | 1 | 150 | 1 | 165 | 0.6373 |
0.8858 |
| 1yr0-assembly2.cif.gz_D | 2 | 149 | 1 | 163 | 0.635 |
0.8876 |
| 4j3g-assembly2.cif.gz_C | 3 | 149 | 1 | 162 | 0.6299 |
0.883 |
| 2i79-assembly3.cif.gz_D | 2 | 150 | 1 | 167 | 0.6275 |
0.8832 |
| 2i79-assembly1.cif.gz_E | 2 | 149 | 1 | 168 | 0.624 |
0.8866 |
| 5dwn-assembly2.cif.gz_C | 1 | 151 | 1 | 167 | 0.622 |
0.895 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71043-F1-model_v4 | 3 | 150 | 1 | 163 | 0.6383 |
0.8922 |
| AF-P46854-F1-model_v4 | 1 | 149 | 2 | 162 | 0.6348 |
0.8788 |
| AF-A6VCX3-F1-model_v4 | 1 | 151 | 1 | 167 | 0.6296 |
0.8895 |
| AF-Q9HUU7-F1-model_v4 | 1 | 151 | 1 | 167 | 0.6277 |
0.8868 |
| AF-Q8ZJW4-F1-model_v4 | 2 | 151 | 1 | 148 | 0.6251 |
0.8292 |
| AF-P0A946-F1-model_v4 | 2 | 151 | 1 | 148 | 0.6239 |
0.8277 |
| AF-Q8ZPD3-F1-model_v4 | 3 | 151 | 1 | 164 | 0.6239 |
0.8892 |
| AF-P0A947-F1-model_v4 | 2 | 151 | 1 | 148 | 0.6238 |
0.8276 |
| AF-P0A945-F1-model_v4 | 2 | 151 | 1 | 148 | 0.6234 |
0.8271 |
| AF-P0A944-F1-model_v4 | 2 | 151 | 1 | 148 | 0.6233 |
0.827 |