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Cluster: HRGMv2_1919_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1919_5 HRGMv2_1919_5_57 63933 64979 - GT2
pfam HRGMv2_1919_5 HRGMv2_1919_5_58 65016 66269 - Collagen | Collagen
TC HRGMv2_1919_5 HRGMv2_1919_5_59 66378 67706 - 2.A.66.1.32
pfam HRGMv2_1919_5 HRGMv2_1919_5_60 68001 68906 - DAGK_cat | YegS_C
TF HRGMv2_1919_5 HRGMv2_1919_5_61 68903 70399 - HTH_AraC
TC HRGMv2_1919_5 HRGMv2_1919_5_62 70414 71889 - 8.A.59.2.1
pfam HRGMv2_1919_5 HRGMv2_1919_5_63 71876 72844 - Peripla_BP_4
CAZyme HRGMv2_1919_5 HRGMv2_1919_5_64 72993 79454 - GH89
Gene ID: HRGMv2_1919_5_57
Type: CAZyme
Location: 63933 - 64979 (-)
Gene ID: HRGMv2_1919_5_58
Type: pfam
Location: 65016 - 66269 (-)
Gene ID: HRGMv2_1919_5_59
Type: TC
Location: 66378 - 67706 (-)
Gene ID: HRGMv2_1919_5_60
Type: pfam
Location: 68001 - 68906 (-)
Gene ID: HRGMv2_1919_5_61
Type: TF
Location: 68903 - 70399 (-)
Gene ID: HRGMv2_1919_5_62
Type: TC
Location: 70414 - 71889 (-)
Gene ID: HRGMv2_1919_5_63
Type: pfam
Location: 71876 - 72844 (-)
Gene ID: HRGMv2_1919_5_64
Type: CAZyme
Location: 72993 - 79454 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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