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Cluster: HRGMv2_1919_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1919_4 HRGMv2_1919_4_43 56527 57468 + 3.A.1.7.5
TC HRGMv2_1919_4 HRGMv2_1919_4_44 57465 58706 + 3.A.1.7.5
TC HRGMv2_1919_4 HRGMv2_1919_4_45 58718 59476 + 3.A.1.7.5
pfam HRGMv2_1919_4 HRGMv2_1919_4_46 59494 60141 + PhoU | PhoU
pfam HRGMv2_1919_4 HRGMv2_1919_4_47 60180 60794 + PhoU
CAZyme HRGMv2_1919_4 HRGMv2_1919_4_48 60992 66379 + GH84
pfam HRGMv2_1919_4 HRGMv2_1919_4_49 66516 67619 + MMR_HSR1 | FeoB_N | YchF-GTPase_C
TC HRGMv2_1919_4 HRGMv2_1919_4_50 67685 68299 + 9.B.31.1.1
Gene ID: HRGMv2_1919_4_43
Type: TC
Location: 56527 - 57468 (+)
Gene ID: HRGMv2_1919_4_44
Type: TC
Location: 57465 - 58706 (+)
Gene ID: HRGMv2_1919_4_45
Type: TC
Location: 58718 - 59476 (+)
Gene ID: HRGMv2_1919_4_46
Type: pfam
Location: 59494 - 60141 (+)
Gene ID: HRGMv2_1919_4_47
Type: pfam
Location: 60180 - 60794 (+)
Gene ID: HRGMv2_1919_4_48
Type: CAZyme
Location: 60992 - 66379 (+)
Gene ID: HRGMv2_1919_4_49
Type: pfam
Location: 66516 - 67619 (+)
Gene ID: HRGMv2_1919_4_50
Type: TC
Location: 67685 - 68299 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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