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Cluster: HRGMv2_1919_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1919_26 HRGMv2_1919_26_19 20983 22989 - 3.A.1.134.9
TC HRGMv2_1919_26 HRGMv2_1919_26_20 22982 23749 - 3.A.1.134.2
NULL(UNKNOWN) HRGMv2_1919_26 HRGMv2_1919_26_21 23902 24222 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1919_26 HRGMv2_1919_26_22 24294 24950 - ABC2_membrane_5
TC HRGMv2_1919_26 HRGMv2_1919_26_23 24947 25789 - 3.A.1.149.1
TF HRGMv2_1919_26 HRGMv2_1919_26_24 25793 26164 - GntR
peptidase HRGMv2_1919_26 HRGMv2_1919_26_25 26314 27735 - C44.UNW
CAZyme HRGMv2_1919_26 HRGMv2_1919_26_26 27855 29324 - GH77
Gene ID: HRGMv2_1919_26_19
Type: TC
Location: 20983 - 22989 (-)
Gene ID: HRGMv2_1919_26_20
Type: TC
Location: 22982 - 23749 (-)
Gene ID: HRGMv2_1919_26_21
Type:
Location: 23902 - 24222 (-)
Gene ID: HRGMv2_1919_26_22
Type: pfam
Location: 24294 - 24950 (-)
Gene ID: HRGMv2_1919_26_23
Type: TC
Location: 24947 - 25789 (-)
Gene ID: HRGMv2_1919_26_24
Type: TF
Location: 25793 - 26164 (-)
Gene ID: HRGMv2_1919_26_25
Type: peptidase
Location: 26314 - 27735 (-)
Gene ID: HRGMv2_1919_26_26
Type: CAZyme
Location: 27855 - 29324 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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