Cluster: HRGMv2_1919_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_1919
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1919_22 | HRGMv2_1919_22_5 | 2937 | 7139 | + | GH123 |
| TC | HRGMv2_1919_22 | HRGMv2_1919_22_6 | 7633 | 9474 | + | 2.A.16.2.2 |
| CAZyme | HRGMv2_1919_22 | HRGMv2_1919_22_7 | 9663 | 15641 | + | CBM32 | GH89 |
| CAZyme | HRGMv2_1919_22 | HRGMv2_1919_22_8 | 16260 | 21284 | + | CBM32 | CBM32 | GH20 |
Gene ID: HRGMv2_1919_22_5
Type: CAZyme
Location: 2937 - 7139 (+)
Type: CAZyme
Location: 2937 - 7139 (+)
Gene ID: HRGMv2_1919_22_6
Type: TC
Location: 7633 - 9474 (+)
Type: TC
Location: 7633 - 9474 (+)
Gene ID: HRGMv2_1919_22_7
Type: CAZyme
Location: 9663 - 15641 (+)
Type: CAZyme
Location: 9663 - 15641 (+)
Gene ID: HRGMv2_1919_22_8
Type: CAZyme
Location: 16260 - 21284 (+)
Type: CAZyme
Location: 16260 - 21284 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.