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Cluster: HRGMv2_1919_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1919_8 HRGMv2_1919_8_15 14869 16239 - 2.A.25.1.4
pfam HRGMv2_1919_8 HRGMv2_1919_8_16 16600 17175 - CDP-OH_P_transf
TC HRGMv2_1919_8 HRGMv2_1919_8_17 17372 19120 + 3.A.1.106.12
TC HRGMv2_1919_8 HRGMv2_1919_8_18 19110 20762 + 3.A.1.106.11
pfam HRGMv2_1919_8 HRGMv2_1919_8_19 20762 21106 + YgbA_NO
pfam HRGMv2_1919_8 HRGMv2_1919_8_20 21103 21471 + DUF454
CAZyme HRGMv2_1919_8 HRGMv2_1919_8_21 21635 25660 + CBM32 | GH84
TC HRGMv2_1919_8 HRGMv2_1919_8_22 25776 27341 + 2.A.49.5.5
Gene ID: HRGMv2_1919_8_15
Type: TC
Location: 14869 - 16239 (-)
Gene ID: HRGMv2_1919_8_16
Type: pfam
Location: 16600 - 17175 (-)
Gene ID: HRGMv2_1919_8_17
Type: TC
Location: 17372 - 19120 (+)
Gene ID: HRGMv2_1919_8_18
Type: TC
Location: 19110 - 20762 (+)
Gene ID: HRGMv2_1919_8_19
Type: pfam
Location: 20762 - 21106 (+)
Gene ID: HRGMv2_1919_8_20
Type: pfam
Location: 21103 - 21471 (+)
Gene ID: HRGMv2_1919_8_21
Type: CAZyme
Location: 21635 - 25660 (+)
Gene ID: HRGMv2_1919_8_22
Type: TC
Location: 25776 - 27341 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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