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Cluster: HRGMv2_1913_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1913_2 HRGMv2_1913_2_308 317956 318867 + 3.A.1.126.1
TC HRGMv2_1913_2 HRGMv2_1913_2_309 318867 319781 + 3.A.1.126.1
pfam HRGMv2_1913_2 HRGMv2_1913_2_310 319768 320961 + ABC2_membrane_2
pfam HRGMv2_1913_2 HRGMv2_1913_2_311 321295 322146 + PRD | PRD | CAT_RBD
TC HRGMv2_1913_2 HRGMv2_1913_2_312 322308 324203 + 4.A.1.2.6
CAZyme HRGMv2_1913_2 HRGMv2_1913_2_313 324293 325777 + GH1
pfam HRGMv2_1913_2 HRGMv2_1913_2_314 325934 326614 - PG_binding_1 | PG_binding_2
peptidase HRGMv2_1913_2 HRGMv2_1913_2_315 327004 327921 + C110.UNW
TC HRGMv2_1913_2 HRGMv2_1913_2_316 327936 328967 + 3.A.11.1.3
Gene ID: HRGMv2_1913_2_308
Type: TC
Location: 317956 - 318867 (+)
Gene ID: HRGMv2_1913_2_309
Type: TC
Location: 318867 - 319781 (+)
Gene ID: HRGMv2_1913_2_310
Type: pfam
Location: 319768 - 320961 (+)
Gene ID: HRGMv2_1913_2_311
Type: pfam
Location: 321295 - 322146 (+)
Gene ID: HRGMv2_1913_2_312
Type: TC
Location: 322308 - 324203 (+)
Gene ID: HRGMv2_1913_2_313
Type: CAZyme
Location: 324293 - 325777 (+)
Gene ID: HRGMv2_1913_2_314
Type: pfam
Location: 325934 - 326614 (-)
Gene ID: HRGMv2_1913_2_315
Type: peptidase
Location: 327004 - 327921 (+)
Gene ID: HRGMv2_1913_2_316
Type: TC
Location: 327936 - 328967 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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