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Cluster: HRGMv2_1913_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1913_1 HRGMv2_1913_1_371 367205 369472 - GT2
pfam HRGMv2_1913_1 HRGMv2_1913_1_372 369491 369904 - CTP_transf_like
TC HRGMv2_1913_1 HRGMv2_1913_1_373 369915 370751 - 3.A.1.104.2
TC HRGMv2_1913_1 HRGMv2_1913_1_374 370763 371569 - 3.A.1.104.1
STP HRGMv2_1913_1 HRGMv2_1913_1_375 371893 372702 - PIG-L
pfam HRGMv2_1913_1 HRGMv2_1913_1_376 372797 373798 - NAD_Gly3P_dh_N | ApbA | F420_oxidored | NAD_Gly3P_dh_C | GPD_NAD_C_bact
CAZyme HRGMv2_1913_1 HRGMv2_1913_1_377 373903 375762 - CBM48 | GH13_9
pfam HRGMv2_1913_1 HRGMv2_1913_1_378 376164 377858 - PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
pfam HRGMv2_1913_1 HRGMv2_1913_1_379 378320 379078 - Glucosamine_iso
TC HRGMv2_1913_1 HRGMv2_1913_1_380 379729 379995 - 8.A.8.1.3
Gene ID: HRGMv2_1913_1_371
Type: CAZyme
Location: 367205 - 369472 (-)
Gene ID: HRGMv2_1913_1_372
Type: pfam
Location: 369491 - 369904 (-)
Gene ID: HRGMv2_1913_1_373
Type: TC
Location: 369915 - 370751 (-)
Gene ID: HRGMv2_1913_1_374
Type: TC
Location: 370763 - 371569 (-)
Gene ID: HRGMv2_1913_1_375
Type: STP
Location: 371893 - 372702 (-)
Gene ID: HRGMv2_1913_1_376
Type: pfam
Location: 372797 - 373798 (-)
Gene ID: HRGMv2_1913_1_377
Type: CAZyme
Location: 373903 - 375762 (-)
Gene ID: HRGMv2_1913_1_378
Type: pfam
Location: 376164 - 377858 (-)
Gene ID: HRGMv2_1913_1_379
Type: pfam
Location: 378320 - 379078 (-)
Gene ID: HRGMv2_1913_1_380
Type: TC
Location: 379729 - 379995 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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