Cluster: HRGMv2_1913_CGC27
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1913
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1913_22 | HRGMv2_1913_22_54 | 56099 | 56512 | - | 4.A.6.1.15 |
| TC | HRGMv2_1913_22 | HRGMv2_1913_22_55 | 56585 | 57406 | - | 4.A.6.1.19 |
| TC | HRGMv2_1913_22 | HRGMv2_1913_22_56 | 57410 | 58174 | - | 4.A.6.1.17 |
| TC | HRGMv2_1913_22 | HRGMv2_1913_22_57 | 58197 | 58673 | - | 4.A.6.1.17 |
| pfam | HRGMv2_1913_22 | HRGMv2_1913_22_58 | 58709 | 59731 | - | GFO_IDH_MocA | GFO_IDH_MocA_C | NAD_binding_3 | GFO_IDH_MocA_C3 |
| pfam | HRGMv2_1913_22 | HRGMv2_1913_22_59 | 60140 | 61060 | - | PDDEXK_2 |
| TC | HRGMv2_1913_22 | HRGMv2_1913_22_60 | 61514 | 63601 | - | 4.A.3.2.8 |
| CAZyme | HRGMv2_1913_22 | HRGMv2_1913_22_61 | 64052 | 65497 | - | GH1 |
| NULL(UNKNOWN) | HRGMv2_1913_22 | HRGMv2_1913_22_62 | 65494 | 66159 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1913_22 | HRGMv2_1913_22_63 | 66140 | 67582 | - | GH1 |
| TC | HRGMv2_1913_22 | HRGMv2_1913_22_64 | 67582 | 67932 | - | 4.A.3.2.3 |
| TC | HRGMv2_1913_22 | HRGMv2_1913_22_65 | 67947 | 69200 | - | 4.A.3.2.8 |
Gene ID: HRGMv2_1913_22_54
Type: TC
Location: 56099 - 56512 (-)
Type: TC
Location: 56099 - 56512 (-)
Gene ID: HRGMv2_1913_22_55
Type: TC
Location: 56585 - 57406 (-)
Type: TC
Location: 56585 - 57406 (-)
Gene ID: HRGMv2_1913_22_56
Type: TC
Location: 57410 - 58174 (-)
Type: TC
Location: 57410 - 58174 (-)
Gene ID: HRGMv2_1913_22_57
Type: TC
Location: 58197 - 58673 (-)
Type: TC
Location: 58197 - 58673 (-)
Gene ID: HRGMv2_1913_22_58
Type: pfam
Location: 58709 - 59731 (-)
Type: pfam
Location: 58709 - 59731 (-)
Gene ID: HRGMv2_1913_22_59
Type: pfam
Location: 60140 - 61060 (-)
Type: pfam
Location: 60140 - 61060 (-)
Gene ID: HRGMv2_1913_22_60
Type: TC
Location: 61514 - 63601 (-)
Type: TC
Location: 61514 - 63601 (-)
Gene ID: HRGMv2_1913_22_61
Type: CAZyme
Location: 64052 - 65497 (-)
Type: CAZyme
Location: 64052 - 65497 (-)
Gene ID: HRGMv2_1913_22_62
Type:
Location: 65494 - 66159 (-)
Type:
Location: 65494 - 66159 (-)
Gene ID: HRGMv2_1913_22_63
Type: CAZyme
Location: 66140 - 67582 (-)
Type: CAZyme
Location: 66140 - 67582 (-)
Gene ID: HRGMv2_1913_22_64
Type: TC
Location: 67582 - 67932 (-)
Type: TC
Location: 67582 - 67932 (-)
Gene ID: HRGMv2_1913_22_65
Type: TC
Location: 67947 - 69200 (-)
Type: TC
Location: 67947 - 69200 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Clostridium_AQ
Species
Clostridium_AQ sp000165065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.