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Cluster: HRGMv2_1913_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1913_7 HRGMv2_1913_7_135 144713 145015 + 4.A.3.2.8
TC HRGMv2_1913_7 HRGMv2_1913_7_136 145019 146317 + 4.A.3.2.6
peptidase HRGMv2_1913_7 HRGMv2_1913_7_137 146317 149475 + M24.UNW
TF HRGMv2_1913_7 HRGMv2_1913_7_138 149508 151340 + HTH_11 | Mga
CAZyme HRGMv2_1913_7 HRGMv2_1913_7_139 151355 152794 + GH1
TC HRGMv2_1913_7 HRGMv2_1913_7_140 153346 153753 - 4.A.6.1.19
pfam HRGMv2_1913_7 HRGMv2_1913_7_141 153750 156530 - Sigma54_activat | PRD | EIIA-man
pfam HRGMv2_1913_7 HRGMv2_1913_7_142 156923 157396 + PTSIIB_sorb
TC HRGMv2_1913_7 HRGMv2_1913_7_143 157411 158163 + 4.A.6.1.19
TC HRGMv2_1913_7 HRGMv2_1913_7_144 158150 158986 + 4.A.6.1.1
Gene ID: HRGMv2_1913_7_135
Type: TC
Location: 144713 - 145015 (+)
Gene ID: HRGMv2_1913_7_136
Type: TC
Location: 145019 - 146317 (+)
Gene ID: HRGMv2_1913_7_137
Type: peptidase
Location: 146317 - 149475 (+)
Gene ID: HRGMv2_1913_7_138
Type: TF
Location: 149508 - 151340 (+)
Gene ID: HRGMv2_1913_7_139
Type: CAZyme
Location: 151355 - 152794 (+)
Gene ID: HRGMv2_1913_7_140
Type: TC
Location: 153346 - 153753 (-)
Gene ID: HRGMv2_1913_7_141
Type: pfam
Location: 153750 - 156530 (-)
Gene ID: HRGMv2_1913_7_142
Type: pfam
Location: 156923 - 157396 (+)
Gene ID: HRGMv2_1913_7_143
Type: TC
Location: 157411 - 158163 (+)
Gene ID: HRGMv2_1913_7_144
Type: TC
Location: 158150 - 158986 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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