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Cluster: HRGMv2_1911_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1911_3 HRGMv2_1911_3_93 90663 92300 + 2.A.58.2.2
TC HRGMv2_1911_3 HRGMv2_1911_3_94 92332 93672 + 2.A.66.1.29
pfam HRGMv2_1911_3 HRGMv2_1911_3_95 93669 93959 - AzlD
pfam HRGMv2_1911_3 HRGMv2_1911_3_96 93956 94648 - AzlC
TC HRGMv2_1911_3 HRGMv2_1911_3_97 94806 96740 + 9.B.18.2.1
pfam HRGMv2_1911_3 HRGMv2_1911_3_98 96855 98135 + DegT_DnrJ_EryC1
TC HRGMv2_1911_3 HRGMv2_1911_3_99 98148 98915 + 9.B.18.1.1
CAZyme HRGMv2_1911_3 HRGMv2_1911_3_100 99412 100173 + GT2
pfam HRGMv2_1911_3 HRGMv2_1911_3_101 100177 100971 + Glycos_transf_2
CAZyme HRGMv2_1911_3 HRGMv2_1911_3_102 101076 102287 + GT4
pfam HRGMv2_1911_3 HRGMv2_1911_3_103 102301 103494 + Wzy_C
CAZyme HRGMv2_1911_3 HRGMv2_1911_3_104 103505 104722 + GT4
pfam HRGMv2_1911_3 HRGMv2_1911_3_105 104725 105888 + Glycos_transf_1
TC HRGMv2_1911_3 HRGMv2_1911_3_106 106092 107126 + 9.B.18.2.1
Gene ID: HRGMv2_1911_3_93
Type: TC
Location: 90663 - 92300 (+)
Gene ID: HRGMv2_1911_3_94
Type: TC
Location: 92332 - 93672 (+)
Gene ID: HRGMv2_1911_3_95
Type: pfam
Location: 93669 - 93959 (-)
Gene ID: HRGMv2_1911_3_96
Type: pfam
Location: 93956 - 94648 (-)
Gene ID: HRGMv2_1911_3_97
Type: TC
Location: 94806 - 96740 (+)
Gene ID: HRGMv2_1911_3_98
Type: pfam
Location: 96855 - 98135 (+)
Gene ID: HRGMv2_1911_3_99
Type: TC
Location: 98148 - 98915 (+)
Gene ID: HRGMv2_1911_3_100
Type: CAZyme
Location: 99412 - 100173 (+)
Gene ID: HRGMv2_1911_3_101
Type: pfam
Location: 100177 - 100971 (+)
Gene ID: HRGMv2_1911_3_102
Type: CAZyme
Location: 101076 - 102287 (+)
Gene ID: HRGMv2_1911_3_103
Type: pfam
Location: 102301 - 103494 (+)
Gene ID: HRGMv2_1911_3_104
Type: CAZyme
Location: 103505 - 104722 (+)
Gene ID: HRGMv2_1911_3_105
Type: pfam
Location: 104725 - 105888 (+)
Gene ID: HRGMv2_1911_3_106
Type: TC
Location: 106092 - 107126 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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