Cluster: HRGMv2_1911_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1911
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1911_2 | HRGMv2_1911_2_61 | 58164 | 59552 | - | GH1 |
| NULL(UNKNOWN) | HRGMv2_1911_2 | HRGMv2_1911_2_62 | 59549 | 59848 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1911_2 | HRGMv2_1911_2_63 | 59848 | 60627 | - | 4.A.6.1.1 |
| TC | HRGMv2_1911_2 | HRGMv2_1911_2_64 | 60629 | 61453 | - | 4.A.6.1.19 |
| TC | HRGMv2_1911_2 | HRGMv2_1911_2_65 | 61468 | 61962 | - | 4.A.6.1.9 |
Gene ID: HRGMv2_1911_2_61
Type: CAZyme
Location: 58164 - 59552 (-)
Type: CAZyme
Location: 58164 - 59552 (-)
Gene ID: HRGMv2_1911_2_62
Type:
Location: 59549 - 59848 (-)
Type:
Location: 59549 - 59848 (-)
Gene ID: HRGMv2_1911_2_63
Type: TC
Location: 59848 - 60627 (-)
Type: TC
Location: 59848 - 60627 (-)
Gene ID: HRGMv2_1911_2_64
Type: TC
Location: 60629 - 61453 (-)
Type: TC
Location: 60629 - 61453 (-)
Gene ID: HRGMv2_1911_2_65
Type: TC
Location: 61468 - 61962 (-)
Type: TC
Location: 61468 - 61962 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Absicoccus
Species
Absicoccus porci
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.