Cluster: HRGMv2_1906_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1906
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1906_2 | HRGMv2_1906_2_99 | 108682 | 110004 | - | GH32 |
| pfam | HRGMv2_1906_2 | HRGMv2_1906_2_100 | 110109 | 110843 | + | S6PP | Hydrolase_3 |
| pfam | HRGMv2_1906_2 | HRGMv2_1906_2_101 | 110852 | 111502 | - | Hydrolase | Hydrolase_like | HAD_2 |
| TC | HRGMv2_1906_2 | HRGMv2_1906_2_102 | 111575 | 112924 | - | 2.A.66.1.32 |
Gene ID: HRGMv2_1906_2_99
Type: CAZyme
Location: 108682 - 110004 (-)
Type: CAZyme
Location: 108682 - 110004 (-)
Gene ID: HRGMv2_1906_2_100
Type: pfam
Location: 110109 - 110843 (+)
Type: pfam
Location: 110109 - 110843 (+)
Gene ID: HRGMv2_1906_2_101
Type: pfam
Location: 110852 - 111502 (-)
Type: pfam
Location: 110852 - 111502 (-)
Gene ID: HRGMv2_1906_2_102
Type: TC
Location: 111575 - 112924 (-)
Type: TC
Location: 111575 - 112924 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Species
Allocoprobacillus sp002160865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.